dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01914
Location and strand information: 89204 - 92455 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01915
Location and strand information: 92499 - 93017 (-)
Family: Sigma70_r2+Sigma70_r4_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01916
Location and strand information: 93440 - 94852 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2714
Protein molecular weight: 52626.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01917
Location and strand information: 95046 - 99182 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01918
Location and strand information: 99394 - 101754 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01919
Location and strand information: 101774 - 103807 (-)
Family: 1.B.14.6.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01920
Location and strand information: 103840 - 104397 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01921
Location and strand information: 104563 - 107319 (-)
Family: PL40
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5815
Protein molecular weight: 102866.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01922
Location and strand information: 107482 - 109389 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: Electron transport complex subunit RsxB

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01923
Location and strand information: 109402 - 111168 (+)
Family: 3.D.1.6.1
Protein type: TC
Protein description: NADP-reducing hydrogenase subunit HndD

Gene clsuter ID: MGYG000003252_156|CGC3
Gene ID: MGYG000003252_01924
Location and strand information: 111187 - 111663 (+)
Family: 3.D.1.5.1
Protein type: TC
Protein description: NADP-reducing hydrogenase subunit HndA

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003252_01914	hypothetical protein	TC	89204	92455	-	1.B.14.6.1
MGYG000003252_01915	hypothetical protein	STP	92499	93017	-	Sigma70_r2\| Sigma70_r4_2
MGYG000003252_01916	hypothetical protein	CAZyme	93440	94852	-	GH28
MGYG000003252_01917	Sensor histidine kinase RcsC	TF	95046	99182	-	HTH_AraC+HTH_AraC
MGYG000003252_01918	hypothetical protein	null	99394	101754	-	No domain
MGYG000003252_01919	hypothetical protein	TC	101774	103807	-	1.B.14.6.8
MGYG000003252_01920	hypothetical protein	null	103840	104397	-	DUF3575
MGYG000003252_01921	hypothetical protein	CAZyme	104563	107319	-	PL40
MGYG000003252_01922	Electron transport complex subunit RsxB	TC	107482	109389	+	3.D.1.5.1
MGYG000003252_01923	NADP-reducing hydrogenase subunit HndD	TC	109402	111168	+	3.D.1.6.1
MGYG000003252_01924	NADP-reducing hydrogenase subunit HndA	TC	111187	111663	+	3.D.1.5.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature