dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00588
Location and strand information: 94477 - 95610 (+)
Family: GT19
Protein type: CAZyme
Protein description: Lipid-A-disaccharide synthase
Protein isoelectric point: 9.2598
Protein molecular weight: 42620.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00589
Location and strand information: 95657 - 96673 (-)
Family: 3.A.1.13.2
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00590
Location and strand information: 96673 - 97701 (-)
Family: 3.A.1.13.2
Protein type: TC
Protein description: Hemin transport system permease protein HmuU

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00591
Location and strand information: 97701 - 98828 (-)
Family: 3.A.1.13.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00592
Location and strand information: 99596 - 101671 (+)
Family: null
Protein type: null
Protein description: Vitamin B12 transporter BtuB

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00593
Location and strand information: 101981 - 103948 (-)
Family: null
Protein type: null
Protein description: Phosphoglycerol transferase I

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00594
Location and strand information: 104300 - 105733 (+)
Family: CBM6|PL1|CBM35|CE8|PL1_2|CBM88
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1299
Protein molecular weight: 52436.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00595
Location and strand information: 105844 - 107529 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2281
Protein molecular weight: 61114.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00596
Location and strand information: 107615 - 108871 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00597
Location and strand information: 108901 - 113328 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003282_6|CGC2
Gene ID: MGYG000003282_00598
Location and strand information: 113479 - 115452 (+)
Family: PL9_1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6331
Protein molecular weight: 70818.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003282_00588	Lipid-A-disaccharide synthase	CAZyme	94477	95610	+	GT19
MGYG000003282_00589	Vitamin B12 import ATP-binding protein BtuD	TC	95657	96673	-	3.A.1.13.2
MGYG000003282_00590	Hemin transport system permease protein HmuU	TC	96673	97701	-	3.A.1.13.2
MGYG000003282_00591	hypothetical protein	TC	97701	98828	-	3.A.1.13.2
MGYG000003282_00592	Vitamin B12 transporter BtuB	null	99596	101671	+	Plug\| TonB_dep_Rec
MGYG000003282_00593	Phosphoglycerol transferase I	null	101981	103948	-	Sulfatase
MGYG000003282_00594	hypothetical protein	CAZyme	104300	105733	+	CBM6\| PL1\| CBM35\| CE8\| PL1_2\| CBM88
MGYG000003282_00595	hypothetical protein	CAZyme	105844	107529	+	GH28
MGYG000003282_00596	hypothetical protein	null	107615	108871	+	DUF4861
MGYG000003282_00597	Sensor histidine kinase RcsC	TF	108901	113328	+	HTH_AraC+HTH_AraC
MGYG000003282_00598	hypothetical protein	CAZyme	113479	115452	+	PL9_1
Protein ID	Protein Name	Type	Start	End	Strand	Signature