dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02893
Location and strand information: 251168 - 251971 (-)
Family: 3.A.1.1.23
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02894
Location and strand information: 251968 - 252903 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02895
Location and strand information: 252976 - 254370 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02896
Location and strand information: 254465 - 256207 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02897
Location and strand information: 256200 - 257789 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02898
Location and strand information: 257936 - 260125 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02899
Location and strand information: 260334 - 261941 (-)
Family: GH3
Protein type: CAZyme
Protein description: Beta-hexosaminidase
Protein isoelectric point: 4.9048
Protein molecular weight: 57447.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02900
Location and strand information: 261989 - 263596 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02901
Location and strand information: 263571 - 265415 (-)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02902
Location and strand information: 265467 - 266294 (-)
Family: 3.A.1.1.47
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003359_29|CGC1
Gene ID: MGYG000003359_02903
Location and strand information: 266294 - 267178 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: Lactose transport system permease protein LacF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is chitin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003359_02893	Lactose transport system permease protein LacG	TC	251168	251971	-	3.A.1.1.23
MGYG000003359_02894	Lactose transport system permease protein LacF	TC	251968	252903	-	3.A.1.1.11
MGYG000003359_02895	hypothetical protein	STP	252976	254370	-	SBP_bac_1
MGYG000003359_02896	hypothetical protein	TC	254465	256207	-	8.A.59.2.1
MGYG000003359_02897	HTH-type transcriptional activator RhaR	TF	256200	257789	-	HTH_AraC+HTH_AraC
MGYG000003359_02898	hypothetical protein	null	257936	260125	-	Cu_amine_oxidN1
MGYG000003359_02899	Beta-hexosaminidase	CAZyme	260334	261941	-	GH3
MGYG000003359_02900	Regulator of RpoS	TF	261989	263596	-	HTH_AraC+HTH_AraC
MGYG000003359_02901	hypothetical protein	TC	263571	265415	-	8.A.59.2.1
MGYG000003359_02902	L-arabinose transport system permease protein AraQ	TC	265467	266294	-	3.A.1.1.47
MGYG000003359_02903	Lactose transport system permease protein LacF	TC	266294	267178	-	3.A.1.1.36
Protein ID	Protein Name	Type	Start	End	Strand	Signature