dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04495
Location and strand information: 15238 - 16623 (+)
Family: 3.A.1.1.21
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04496
Location and strand information: 16714 - 17607 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04497
Location and strand information: 17648 - 18487 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04498
Location and strand information: 18497 - 20959 (+)
Family: GH43|CBM6|GH43_32|CBM66
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4373
Protein molecular weight: 90597.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04499
Location and strand information: 20982 - 22742 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.8108
Protein molecular weight: 68145.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04500
Location and strand information: 22797 - 23582 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04501
Location and strand information: 23602 - 24423 (-)
Family: null
Protein type: null
Protein description: Energy-coupling factor transporter transmembrane protein EcfT

Gene clsuter ID: MGYG000003359_49|CGC2
Gene ID: MGYG000003359_04502
Location and strand information: 24398 - 26248 (-)
Family: 3.A.1.32.3
Protein type: TC
Protein description: Putative HMP/thiamine import ATP-binding protein YkoD

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003359_04495	hypothetical protein	TC	15238	16623	+	3.A.1.1.21
MGYG000003359_04496	Lactose transport system permease protein LacF	TC	16714	17607	+	3.A.1.1.11
MGYG000003359_04497	L-arabinose transport system permease protein AraQ	TC	17648	18487	+	3.A.1.1.11
MGYG000003359_04498	hypothetical protein	CAZyme	18497	20959	+	GH43\| CBM6\| GH43_32\| CBM66
MGYG000003359_04499	Beta-galactosidase	CAZyme	20982	22742	+	GH2
MGYG000003359_04500	hypothetical protein	null	22797	23582	-	PHP\| PHP_C
MGYG000003359_04501	Energy-coupling factor transporter transmembrane protein EcfT	null	23602	24423	-	CbiQ
MGYG000003359_04502	Putative HMP/thiamine import ATP-binding protein YkoD	TC	24398	26248	-	3.A.1.32.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature