dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01800
Location and strand information: 4716 - 6284 (+)
Family: 2.A.21.2.2
Protein type: TC
Protein description: Sodium/proline symporter

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01801
Location and strand information: 6351 - 7277 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01802
Location and strand information: 7309 - 9474 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01803
Location and strand information: 9492 - 11573 (-)
Family: GH36
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3715
Protein molecular weight: 77655.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01804
Location and strand information: 11593 - 12525 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01805
Location and strand information: 12530 - 13444 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01806
Location and strand information: 13441 - 15669 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01807
Location and strand information: 15685 - 17772 (-)
Family: TPR_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01808
Location and strand information: 17786 - 18667 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003412_46|CGC1
Gene ID: MGYG000003412_01809
Location and strand information: 18660 - 19586 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003412_01800	Sodium/proline symporter	TC	4716	6284	+	2.A.21.2.2
MGYG000003412_01801	HTH-type transcriptional activator RhaS	TF	6351	7277	-	HTH_AraC+HTH_AraC
MGYG000003412_01802	hypothetical protein	null	7309	9474	-	No domain
MGYG000003412_01803	hypothetical protein	CAZyme	9492	11573	-	GH36
MGYG000003412_01804	L-arabinose transport system permease protein AraQ	TC	11593	12525	-	3.A.1.1.11
MGYG000003412_01805	hypothetical protein	TC	12530	13444	-	3.A.1.1.11
MGYG000003412_01806	hypothetical protein	null	13441	15669	-	DUF5696
MGYG000003412_01807	hypothetical protein	STP	15685	17772	-	TPR_2
MGYG000003412_01808	L-arabinose transport system permease protein AraQ	TC	17786	18667	-	3.A.1.1.36
MGYG000003412_01809	Lactose transport system permease protein LacF	TC	18660	19586	-	3.A.1.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature