dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00390
Location and strand information: 15 - 1757 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 9.0244
Protein molecular weight: 65847.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00391
Location and strand information: 1795 - 2112 (+)
Family: null
Protein type: null
Protein description: L-rhamnose mutarotase

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00392
Location and strand information: 2380 - 3681 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7778
Protein molecular weight: 48934.38
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00393
Location and strand information: 3749 - 5377 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3082
Protein molecular weight: 60487.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00394
Location and strand information: 5425 - 8319 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00395
Location and strand information: 8647 - 11817 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00396
Location and strand information: 11842 - 13977 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00397
Location and strand information: 14122 - 15954 (+)
Family: PL11|PL11_1|CBM2|CBM35
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.6608
Protein molecular weight: 67952.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00398
Location and strand information: 15977 - 17458 (+)
Family: null
Protein type: null
Protein description: Rhamnulokinase

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00399
Location and strand information: 17471 - 18724 (+)
Family: null
Protein type: null
Protein description: L-rhamnose isomerase

Gene clsuter ID: MGYG000003816_19|CGC1
Gene ID: MGYG000003816_00400
Location and strand information: 18795 - 19829 (+)
Family: 2.A.7.6.1
Protein type: TC
Protein description: L-rhamnose-proton symporter

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003816_00390	Beta-galactosidase BoGH2A	CAZyme	15	1757	+	GH2
MGYG000003816_00391	L-rhamnose mutarotase	null	1795	2112	+	rhaM
MGYG000003816_00392	hypothetical protein	CAZyme	2380	3681	+	CE12
MGYG000003816_00393	hypothetical protein	CAZyme	3749	5377	+	CE12
MGYG000003816_00394	HTH-type transcriptional activator RhaR	TF	5425	8319	+	HTH_AraC+HTH_AraC
MGYG000003816_00395	TonB-dependent receptor SusC	TC	8647	11817	+	1.B.14.6.1
MGYG000003816_00396	hypothetical protein	null	11842	13977	+	SusD-like_3\| SusD_RagB
MGYG000003816_00397	Rhamnogalacturonan endolyase YesW	CAZyme	14122	15954	+	PL11\| PL11_1\| CBM2\| CBM35
MGYG000003816_00398	Rhamnulokinase	null	15977	17458	+	FGGY_N\| FGGY_C
MGYG000003816_00399	L-rhamnose isomerase	null	17471	18724	+	RhaA
MGYG000003816_00400	L-rhamnose-proton symporter	TC	18795	19829	+	2.A.7.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature