dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01655
Location and strand information: 6911 - 8398 (-)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.5921
Protein molecular weight: 56215.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01656
Location and strand information: 8459 - 9412 (-)
Family: null
Protein type: null
Protein description: Pyrimidine-specific ribonucleoside hydrolase RihA

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01657
Location and strand information: 9465 - 10499 (-)
Family: LacI
Protein type: TF
Protein description: Ribose operon repressor

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01658
Location and strand information: 10906 - 12414 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.3265
Protein molecular weight: 56567.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01659
Location and strand information: 12979 - 14490 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.0192
Protein molecular weight: 57096.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01660
Location and strand information: 14508 - 15824 (+)
Family: 3.A.1.1.3
Protein type: TC
Protein description: sn-glycerol-3-phosphate-binding periplasmic protein UgpB

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01661
Location and strand information: 15913 - 16803 (+)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01662
Location and strand information: 16819 - 17655 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01663
Location and strand information: 17675 - 18631 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01664
Location and strand information: 18636 - 19610 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01665
Location and strand information: 19664 - 20638 (+)
Family: 8.A.5.1.3
Protein type: TC
Protein description: L-glyceraldehyde 3-phosphate reductase

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01666
Location and strand information: 20762 - 23026 (+)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1812
Protein molecular weight: 85634.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01667
Location and strand information: 23092 - 24876 (+)
Family: GH43_27
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7469
Protein molecular weight: 65261.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01668
Location and strand information: 25263 - 27032 (-)
Family: null
Protein type: null
Protein description: L-fucose isomerase

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01669
Location and strand information: 27515 - 28834 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01670
Location and strand information: 28878 - 29759 (+)
Family: 3.A.1.1.37
Protein type: TC
Protein description: Trehalose transport system permease protein SugA

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01671
Location and strand information: 29759 - 30625 (+)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01672
Location and strand information: 30755 - 31732 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator DegA

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01673
Location and strand information: 31764 - 33965 (+)
Family: GH36
Protein type: CAZyme
Protein description: Bifunctional alpha-galactosidase/sucrose kinase AgaSK
Protein isoelectric point: 5.3749
Protein molecular weight: 81851.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003872_23|CGC1
Gene ID: MGYG000003872_01674
Location and strand information: 34351 - 35682 (+)
Family: 2.A.66.1.26
Protein type: TC
Protein description: Multidrug export protein MepA

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003872_01655	GH51_e30
MGYG000003872_01658	GH51_e33\|3.2.1.55	arabinan
MGYG000003872_01659	GH51_e0\|3.2.1.55	arabinan
MGYG000003872_01666
MGYG000003872_01667
MGYG000003872_01673	GH36_e25\|3.2.1.22	alpha-galactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003872_01655	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	6911	8398	-	GH51
MGYG000003872_01656	Pyrimidine-specific ribonucleoside hydrolase RihA	null	8459	9412	-	IU_nuc_hydro
MGYG000003872_01657	Ribose operon repressor	TF	9465	10499	-	LacI
MGYG000003872_01658	hypothetical protein	CAZyme	10906	12414	-	GH51
MGYG000003872_01659	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	12979	14490	+	GH51
MGYG000003872_01660	sn-glycerol-3-phosphate-binding periplasmic protein UgpB	TC	14508	15824	+	3.A.1.1.3
MGYG000003872_01661	Lactose transport system permease protein LacF	TC	15913	16803	+	3.A.1.1.20
MGYG000003872_01662	L-arabinose transport system permease protein AraQ	TC	16819	17655	+	3.A.1.1.34
MGYG000003872_01663	hypothetical protein	null	17675	18631	+	Glyco_hydro_88
MGYG000003872_01664	hypothetical protein	null	18636	19610	+	Cellulase
MGYG000003872_01665	L-glyceraldehyde 3-phosphate reductase	TC	19664	20638	+	8.A.5.1.3
MGYG000003872_01666	hypothetical protein	CAZyme	20762	23026	+	GH95
MGYG000003872_01667	hypothetical protein	CAZyme	23092	24876	+	GH43_27
MGYG000003872_01668	L-fucose isomerase	null	25263	27032	-	Fucose_iso_N1\| Fucose_iso_N2\| Fucose_iso_C
MGYG000003872_01669	hypothetical protein	TC	27515	28834	+	3.A.1.1.45
MGYG000003872_01670	Trehalose transport system permease protein SugA	TC	28878	29759	+	3.A.1.1.37
MGYG000003872_01671	L-arabinose transport system permease protein AraQ	TC	29759	30625	+	3.A.1.1.45
MGYG000003872_01672	HTH-type transcriptional regulator DegA	TF	30755	31732	+	LacI
MGYG000003872_01673	Bifunctional alpha-galactosidase/sucrose kinase AgaSK	CAZyme	31764	33965	+	GH36
MGYG000003872_01674	Multidrug export protein MepA	TC	34351	35682	+	2.A.66.1.26
Protein ID	Protein Name	Type	Start	End	Strand	Signature