dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00234
Location and strand information: 264869 - 266395 (+)
Family: 3.A.1.2.20
Protein type: TC
Protein description: Ribose import ATP-binding protein RbsA

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00235
Location and strand information: 266385 - 267347 (+)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00236
Location and strand information: 267369 - 268367 (+)
Family: null
Protein type: null
Protein description: Myo-inositol 2-dehydrogenase

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00237
Location and strand information: 268393 - 269247 (+)
Family: null
Protein type: null
Protein description: L-ribulose 3-epimerase

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00238
Location and strand information: 269392 - 271665 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.5713
Protein molecular weight: 85806.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00239
Location and strand information: 271701 - 272525 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacG

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00240
Location and strand information: 272525 - 273421 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000004143_1|CGC4
Gene ID: MGYG000004143_00241
Location and strand information: 273741 - 275045 (-)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose-binding protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004143_00234	Ribose import ATP-binding protein RbsA	TC	264869	266395	+	3.A.1.2.20
MGYG000004143_00235	Ribose import permease protein RbsC	TC	266385	267347	+	3.A.1.2.1
MGYG000004143_00236	Myo-inositol 2-dehydrogenase	null	267369	268367	+	GFO_IDH_MocA\| GFO_IDH_MocA_C
MGYG000004143_00237	L-ribulose 3-epimerase	null	268393	269247	+	AP_endonuc_2
MGYG000004143_00238	Beta-galactosidase	CAZyme	269392	271665	-	GH2
MGYG000004143_00239	Lactose transport system permease protein LacG	TC	271701	272525	-	3.A.1.1.4
MGYG000004143_00240	Lactose transport system permease protein LacF	TC	272525	273421	-	3.A.1.1.4
MGYG000004143_00241	Lactose-binding protein	TC	273741	275045	-	3.A.1.1.4
Protein ID	Protein Name	Type	Start	End	Strand	Signature