dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01333
Location and strand information: 11220 - 12251 (-)
Family: GH106|GH43|GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 8.033
Protein molecular weight: 38939.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01334
Location and strand information: 12267 - 13502 (-)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0489
Protein molecular weight: 46171.15
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01335
Location and strand information: 13516 - 14601 (-)
Family: GH105|PL0
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.498
Protein molecular weight: 41586.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01336
Location and strand information: 14700 - 18755 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01337
Location and strand information: 18796 - 20829 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01338
Location and strand information: 20873 - 23974 (-)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.4179
Protein molecular weight: 115938.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01339
Location and strand information: 24055 - 25872 (-)
Family: 9.A.25.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01340
Location and strand information: 25893 - 27737 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01341
Location and strand information: 27755 - 30742 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01342
Location and strand information: 30801 - 32510 (-)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004172_5|CGC1
Gene ID: MGYG000004172_01343
Location and strand information: 32517 - 35636 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is host glycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004172_01333	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	11220	12251	-	GH106\| GH43\| GH43_26
MGYG000004172_01334	hypothetical protein	CAZyme	12267	13502	-	GH154
MGYG000004172_01335	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	13516	14601	-	GH105\| PL0
MGYG000004172_01336	Sensor histidine kinase RcsC	TF	14700	18755	+	HTH_AraC+HTH_AraC
MGYG000004172_01337	hypothetical protein	null	18796	20829	-	No domain
MGYG000004172_01338	hypothetical protein	CAZyme	20873	23974	-	GH115
MGYG000004172_01339	hypothetical protein	TC	24055	25872	-	9.A.25.1.1
MGYG000004172_01340	hypothetical protein	null	25893	27737	-	SusD-like_3\| SusD_RagB
MGYG000004172_01341	hypothetical protein	TC	27755	30742	-	1.B.14.6.1
MGYG000004172_01342	hypothetical protein	TC	30801	32510	-	8.A.46.1.3
MGYG000004172_01343	hypothetical protein	TC	32517	35636	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature