dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01410
Location and strand information: 35240 - 37768 (-)
Family: 3.A.3.5.15
Protein type: TC
Protein description: putative copper-importing P-type ATPase A

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01411
Location and strand information: 37816 - 38124 (-)
Family: null
Protein type: null
Protein description: Copper-sensing transcriptional repressor CsoR

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01412
Location and strand information: 38295 - 38477 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01413
Location and strand information: 38715 - 40100 (+)
Family: 2.A.66.1.13
Protein type: TC
Protein description: Multidrug export protein MepA

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01414
Location and strand information: 40152 - 40832 (-)
Family: 1.C.113.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01415
Location and strand information: 40979 - 41617 (+)
Family: 2.A.115.2.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01416
Location and strand information: 42083 - 42376 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01417
Location and strand information: 42999 - 44858 (-)
Family: null
Protein type: null
Protein description: Asparagine synthetase [glutamine-hydrolyzing] 3

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01418
Location and strand information: 44998 - 47103 (+)
Family: 4.A.1.1.9
Protein type: TC
Protein description: PTS system glucose-specific EIICBA component

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01419
Location and strand information: 47252 - 51355 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.7727
Protein molecular weight: 154546.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01420
Location and strand information: 51556 - 52398 (+)
Family: 1.A.16.1.3
Protein type: TC
Protein description: putative formate transporter 1

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01421
Location and strand information: 52489 - 53316 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01422
Location and strand information: 53440 - 57531 (+)
Family: GH2|CBM32
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.3026
Protein molecular weight: 151673.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01423
Location and strand information: 57539 - 58438 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01424
Location and strand information: 58593 - 60572 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7128
Protein molecular weight: 76162.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01425
Location and strand information: 60605 - 64318 (+)
Family: CBM35
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1466
Protein molecular weight: 136185.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01426
Location and strand information: 64427 - 66685 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01427
Location and strand information: 66910 - 67203 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01428
Location and strand information: 67175 - 67954 (+)
Family: 3.A.1.17.8
Protein type: TC
Protein description: Riboflavin transport system permease protein RibX

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01429
Location and strand information: 67981 - 68970 (+)
Family: 3.A.1.17.8
Protein type: TC
Protein description: Formylaminopyrimidine-binding protein

Gene clsuter ID: MGYG000004210_6|CGC1
Gene ID: MGYG000004210_01430
Location and strand information: 69021 - 69785 (+)
Family: 3.A.1.17.13
Protein type: TC
Protein description: Sulfate/thiosulfate import ATP-binding protein CysA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004210_01410	putative copper-importing P-type ATPase A	TC	35240	37768	-	3.A.3.5.15
MGYG000004210_01411	Copper-sensing transcriptional repressor CsoR	null	37816	38124	-	Trns_repr_metal
MGYG000004210_01412	hypothetical protein	null	38295	38477	-	No domain
MGYG000004210_01413	Multidrug export protein MepA	TC	38715	40100	+	2.A.66.1.13
MGYG000004210_01414	hypothetical protein	TC	40152	40832	-	1.C.113.1.10
MGYG000004210_01415	hypothetical protein	TC	40979	41617	+	2.A.115.2.10
MGYG000004210_01416	hypothetical protein	null	42083	42376	+	No domain
MGYG000004210_01417	Asparagine synthetase [glutamine-hydrolyzing] 3	null	42999	44858	-	GATase_7\| Asn_synthase
MGYG000004210_01418	PTS system glucose-specific EIICBA component	TC	44998	47103	+	4.A.1.1.9
MGYG000004210_01419	Beta-galactosidase	CAZyme	47252	51355	+	GH2
MGYG000004210_01420	putative formate transporter 1	TC	51556	52398	+	1.A.16.1.3
MGYG000004210_01421	Arabinose operon regulatory protein	TF	52489	53316	+	HTH_AraC+HTH_AraC
MGYG000004210_01422	Beta-galactosidase	CAZyme	53440	57531	+	GH2\| CBM32
MGYG000004210_01423	HTH-type transcriptional activator RhaS	TF	57539	58438	-	HTH_AraC+HTH_AraC
MGYG000004210_01424	hypothetical protein	CAZyme	58593	60572	+	GH31
MGYG000004210_01425	hypothetical protein	CAZyme	60605	64318	+	CBM35
MGYG000004210_01426	hypothetical protein	null	64427	66685	+	LRR_5\| LRR_5\| LRR_5\| LRR_5
MGYG000004210_01427	hypothetical protein	null	66910	67203	+	Thiamine_BP
MGYG000004210_01428	Riboflavin transport system permease protein RibX	TC	67175	67954	+	3.A.1.17.8
MGYG000004210_01429	Formylaminopyrimidine-binding protein	TC	67981	68970	+	3.A.1.17.8
MGYG000004210_01430	Sulfate/thiosulfate import ATP-binding protein CysA	TC	69021	69785	+	3.A.1.17.13
Protein ID	Protein Name	Type	Start	End	Strand	Signature