dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00773
Location and strand information: 42552 - 43904 (-)
Family: GH88
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.2338
Protein molecular weight: 51944.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00774
Location and strand information: 43943 - 45616 (+)
Family: GH43|GH43_10
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4391
Protein molecular weight: 63182.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00775
Location and strand information: 45746 - 47584 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.0021
Protein molecular weight: 69750.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00776
Location and strand information: 47626 - 49080 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00777
Location and strand information: 49236 - 51146 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 8.3942
Protein molecular weight: 72258.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00778
Location and strand information: 51274 - 53661 (-)
Family: PL40
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8246
Protein molecular weight: 89184.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00779
Location and strand information: 53989 - 54777 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00780
Location and strand information: 55012 - 56361 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00781
Location and strand information: 56439 - 57089 (-)
Family: 3.A.1.211.16
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YxlF

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00782
Location and strand information: 57068 - 57403 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00783
Location and strand information: 57469 - 58542 (-)
Family: GH43_9|GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.6159
Protein molecular weight: 41287.93
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00784
Location and strand information: 58617 - 63239 (-)
Family: GH43|GH2|GH43_9
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.1727
Protein molecular weight: 175892.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00785
Location and strand information: 63300 - 63815 (-)
Family: Sigma70_r2+Sigma70_r4_2
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00786
Location and strand information: 63960 - 67988 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00787
Location and strand information: 68205 - 71498 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00788
Location and strand information: 71538 - 73556 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00789
Location and strand information: 73765 - 75201 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.8166
Protein molecular weight: 53888.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00790
Location and strand information: 75302 - 76135 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00791
Location and strand information: 76122 - 77075 (-)
Family: null
Protein type: null
Protein description: Riboflavin biosynthesis protein RibF

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00792
Location and strand information: 77077 - 79716 (-)
Family: 3.A.3.2.39
Protein type: TC
Protein description: Calcium-transporting ATPase 1

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00794
Location and strand information: 80188 - 82314 (+)
Family: 3.A.3.6.5
Protein type: TC
Protein description: Zinc-transporting ATPase

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00795
Location and strand information: 82396 - 84006 (+)
Family: null
Protein type: null
Protein description: Alkaline phosphatase PafA

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00796
Location and strand information: 84099 - 84764 (-)
Family: null
Protein type: null
Protein description: Leucyl/phenylalanyl-tRNA--protein transferase

Gene clsuter ID: MGYG000004456_6|CGC2
Gene ID: MGYG000004456_00797
Location and strand information: 84771 - 87044 (-)
Family: 3.A.9.1.2
Protein type: TC
Protein description: ATP-dependent Clp protease ATP-binding subunit ClpA

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004456_00773	hypothetical protein	CAZyme	42552	43904	-	GH88
MGYG000004456_00774	hypothetical protein	CAZyme	43943	45616	+	GH43\| GH43_10
MGYG000004456_00775	hypothetical protein	CAZyme	45746	47584	-	GH146
MGYG000004456_00776	hypothetical protein	null	47626	49080	-	No domain
MGYG000004456_00777	Retaining alpha-galactosidase	CAZyme	49236	51146	-	GH97
MGYG000004456_00778	hypothetical protein	CAZyme	51274	53661	-	PL40
MGYG000004456_00779	hypothetical protein	null	53989	54777	-	No domain
MGYG000004456_00780	hypothetical protein	null	55012	56361	+	AAA_14\| DUF4143
MGYG000004456_00781	putative ABC transporter ATP-binding protein YxlF	TC	56439	57089	-	3.A.1.211.16
MGYG000004456_00782	hypothetical protein	null	57068	57403	-	No domain
MGYG000004456_00783	hypothetical protein	CAZyme	57469	58542	-	GH43_9\| GH43_19
MGYG000004456_00784	Beta-galactosidase	CAZyme	58617	63239	-	GH43\| GH2\| GH43_9
MGYG000004456_00785	hypothetical protein	STP	63300	63815	-	Sigma70_r2\| Sigma70_r4_2
MGYG000004456_00786	Sensor histidine kinase RcsC	TF	63960	67988	-	HTH_AraC+HTH_AraC
MGYG000004456_00787	hypothetical protein	TC	68205	71498	+	1.B.14.6.1
MGYG000004456_00788	hypothetical protein	null	71538	73556	+	SusD-like_3\| SusD_RagB
MGYG000004456_00789	hypothetical protein	CAZyme	73765	75201	+	GH28
MGYG000004456_00790	hypothetical protein	null	75302	76135	-	Rce1-like
MGYG000004456_00791	Riboflavin biosynthesis protein RibF	null	76122	77075	-	FAD_syn\| Flavokinase
MGYG000004456_00792	Calcium-transporting ATPase 1	TC	77077	79716	-	3.A.3.2.39
MGYG000004456_00794	Zinc-transporting ATPase	TC	80188	82314	+	3.A.3.6.5
MGYG000004456_00795	Alkaline phosphatase PafA	null	82396	84006	+	Phosphodiest
MGYG000004456_00796	Leucyl/phenylalanyl-tRNA--protein transferase	null	84099	84764	-	Leu_Phe_trans
MGYG000004456_00797	ATP-dependent Clp protease ATP-binding subunit ClpA	TC	84771	87044	-	3.A.9.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature