dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00118
Location and strand information: 47409 - 50558 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.2012
Protein molecular weight: 118109.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00119
Location and strand information: 51158 - 54436 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00120
Location and strand information: 54485 - 56539 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00121
Location and strand information: 56799 - 57659 (+)
Family: GH16|GH16_3
Protein type: CAZyme
Protein description: Beta-glucanase
Protein isoelectric point: 4.6973
Protein molecular weight: 32648.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00122
Location and strand information: 57735 - 58865 (+)
Family: GH16|GH43_24|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1807
Protein molecular weight: 42252.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00123
Location and strand information: 59036 - 62992 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00124
Location and strand information: 63057 - 64307 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9024
Protein molecular weight: 47433.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00125
Location and strand information: 64322 - 65638 (+)
Family: PL42|GH145
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0775
Protein molecular weight: 49475.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00126
Location and strand information: 65730 - 66854 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.4079
Protein molecular weight: 42608.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00127
Location and strand information: 67290 - 71336 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00128
Location and strand information: 71643 - 73109 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00129
Location and strand information: 73159 - 76164 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00130
Location and strand information: 76202 - 77815 (+)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00131
Location and strand information: 77948 - 79552 (+)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.4361
Protein molecular weight: 59332.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00132
Location and strand information: 79816 - 81396 (+)
Family: GH30_4|GH30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2461
Protein molecular weight: 58816.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00133
Location and strand information: 81534 - 83885 (+)
Family: GH35|CBM32
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.883
Protein molecular weight: 87248.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00134
Location and strand information: 84075 - 85994 (+)
Family: GH43|GH43_19|GH43_34
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3522
Protein molecular weight: 72224.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004698_2|CGC2
Gene ID: MGYG000004698_00135
Location and strand information: 86052 - 87077 (+)
Family: GH43|GH43_19|GH43_17
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4706
Protein molecular weight: 38347.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004698_00118
MGYG000004698_00121	GH16_e47
MGYG000004698_00122	GH43_e135\|GH16_e47
MGYG000004698_00124
MGYG000004698_00125	GH145_e0\|3.2.1.-
MGYG000004698_00126	GH105_e2\|3.2.1.-	pectin
MGYG000004698_00131	GH30_e7\|3.2.1.38	beta-fucosides
MGYG000004698_00132	GH30_e50\|3.2.1.38	beta-fucosides
MGYG000004698_00133	GH35_e29\|CBM32_e73
MGYG000004698_00134	GH43_e38\|3.2.1.55	xylan
MGYG000004698_00135	GH43_e181

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-fucosides

Substrate predicted by dbCAN-PUL is agarose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004698_00118	Beta-galactosidase	CAZyme	47409	50558	+	GH2
MGYG000004698_00119	TonB-dependent receptor SusC	TC	51158	54436	+	1.B.14.6.1
MGYG000004698_00120	hypothetical protein	null	54485	56539	+	SusD-like_3\| SusD_RagB
MGYG000004698_00121	Beta-glucanase	CAZyme	56799	57659	+	GH16\| GH16_3
MGYG000004698_00122	hypothetical protein	CAZyme	57735	58865	+	GH16\| GH43_24\| GH43
MGYG000004698_00123	Sensor histidine kinase RcsC	TF	59036	62992	+	HTH_AraC
MGYG000004698_00124	hypothetical protein	CAZyme	63057	64307	+	GH154
MGYG000004698_00125	hypothetical protein	CAZyme	64322	65638	+	PL42\| GH145
MGYG000004698_00126	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	65730	66854	+	GH105
MGYG000004698_00127	Sensor histidine kinase RcsC	TF	67290	71336	-	HTH_AraC+HTH_AraC
MGYG000004698_00128	hypothetical protein	null	71643	73109	+	No domain
MGYG000004698_00129	TonB-dependent receptor SusC	TC	73159	76164	+	1.B.14.6.1
MGYG000004698_00130	SusD-like protein	null	76202	77815	+	SusD-like_3\| SusD_RagB
MGYG000004698_00131	hypothetical protein	CAZyme	77948	79552	+	GH30_4\| GH30
MGYG000004698_00132	hypothetical protein	CAZyme	79816	81396	+	GH30_4\| GH30
MGYG000004698_00133	hypothetical protein	CAZyme	81534	83885	+	GH35\| CBM32
MGYG000004698_00134	hypothetical protein	CAZyme	84075	85994	+	GH43\| GH43_19\| GH43_34
MGYG000004698_00135	hypothetical protein	CAZyme	86052	87077	+	GH43\| GH43_19\| GH43_17
Protein ID	Protein Name	Type	Start	End	Strand	Signature