dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00542
Location and strand information: 21960 - 22856 (+)
Family: 3.A.1.34.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00543
Location and strand information: 22849 - 23622 (+)
Family: 3.A.1.34.1
Protein type: TC
Protein description: Choline transport ATP-binding protein OpuBA

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00544
Location and strand information: 23719 - 24990 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: L-methionine gamma-lyase

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00545
Location and strand information: 25029 - 25421 (+)
Family: null
Protein type: null
Protein description: Blasticidin-S deaminase

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00546
Location and strand information: 25479 - 26579 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.6399
Protein molecular weight: 42344.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00547
Location and strand information: 26736 - 29330 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00548
Location and strand information: 29704 - 29964 (+)
Family: 8.A.8.1.4
Protein type: TC
Protein description: HPr-like protein Crh

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00549
Location and strand information: 30076 - 31950 (+)
Family: null
Protein type: null
Protein description: UvrABC system protein C

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00550
Location and strand information: 31989 - 32381 (+)
Family: null
Protein type: null
Protein description: putative manganese catalase

Gene clsuter ID: MGYG000004707_10|CGC1
Gene ID: MGYG000004707_00551
Location and strand information: 32678 - 35452 (+)
Family: 3.A.5.1.3
Protein type: TC
Protein description: Protein translocase subunit SecA

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004707_00542	hypothetical protein	TC	21960	22856	+	3.A.1.34.1
MGYG000004707_00543	Choline transport ATP-binding protein OpuBA	TC	22849	23622	+	3.A.1.34.1
MGYG000004707_00544	L-methionine gamma-lyase	STP	23719	24990	+	Aminotran_1_2
MGYG000004707_00545	Blasticidin-S deaminase	null	25029	25421	+	dCMP_cyt_deam_1
MGYG000004707_00546	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	25479	26579	-	GH105
MGYG000004707_00547	hypothetical protein	null	26736	29330	-	Cu_amine_oxidN1\| Cu_amine_oxidN1
MGYG000004707_00548	HPr-like protein Crh	TC	29704	29964	+	8.A.8.1.4
MGYG000004707_00549	UvrABC system protein C	null	30076	31950	+	GIY-YIG\| UVR\| UvrC_RNaseH_dom
MGYG000004707_00550	putative manganese catalase	null	31989	32381	+	Mn_catalase
MGYG000004707_00551	Protein translocase subunit SecA	TC	32678	35452	+	3.A.5.1.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature