dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004774_72|CGC1
Gene ID: MGYG000004774_02274
Location and strand information: 5317 - 6720 (-)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galacturonidase
Protein isoelectric point: 4.7346
Protein molecular weight: 52658.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004774_72|CGC1
Gene ID: MGYG000004774_02275
Location and strand information: 7113 - 8075 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000004774_72|CGC1
Gene ID: MGYG000004774_02276
Location and strand information: 8063 - 9562 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000004774_72|CGC1
Gene ID: MGYG000004774_02277
Location and strand information: 9556 - 10263 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: Sensor histidine kinase BtsS

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004774_02274	Alpha-galacturonidase	CAZyme	5317	6720	-	GH4
MGYG000004774_02275	HTH-type transcriptional activator RhaR	TF	7113	8075	+	HTH_AraC+HTH_AraC
MGYG000004774_02276	Chemotaxis response regulator protein-glutamate methylesterase	TF	8063	9562	-	HTH_AraC+HTH_AraC
MGYG000004774_02277	Sensor histidine kinase BtsS	TC	9556	10263	-	9.B.33.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature