dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01470
Location and strand information: 19370 - 20311 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2808
Protein molecular weight: 35748.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01471
Location and strand information: 20382 - 22961 (-)
Family: null
Protein type: null
Protein description: Peptide chain release factor 3

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01472
Location and strand information: 23261 - 25999 (+)
Family: PL1|CBM77
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1399
Protein molecular weight: 98286.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01473
Location and strand information: 26162 - 28309 (+)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6892
Protein molecular weight: 83189.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01474
Location and strand information: 28580 - 29554 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01475
Location and strand information: 29577 - 30458 (+)
Family: 3.A.1.1.9
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01476
Location and strand information: 30483 - 32081 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000004845_12|CGC1
Gene ID: MGYG000004845_01477
Location and strand information: 32308 - 33906 (+)
Family: PL0|PL11
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.3304
Protein molecular weight: 59615.26
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004845_01470	hypothetical protein	CAZyme	19370	20311	+	GT2
MGYG000004845_01471	Peptide chain release factor 3	null	20382	22961	-	GTP_EFTU\| EFG_IV\| EFG_C\| NYN_YacP
MGYG000004845_01472	hypothetical protein	CAZyme	23261	25999	+	PL1\| CBM77
MGYG000004845_01473	hypothetical protein	CAZyme	26162	28309	+	GH105
MGYG000004845_01474	putative multiple-sugar transport system permease YteP	TC	28580	29554	+	3.A.1.1.10
MGYG000004845_01475	L-arabinose transport system permease protein AraQ	TC	29577	30458	+	3.A.1.1.9
MGYG000004845_01476	Lipoprotein LipO	STP	30483	32081	+	SBP_bac_1
MGYG000004845_01477	hypothetical protein	CAZyme	32308	33906	+	PL0\| PL11
Protein ID	Protein Name	Type	Start	End	Strand	Signature