dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00533
Location and strand information: 87281 - 89596 (-)
Family: GH31
Protein type: CAZyme
Protein description: Alpha-xylosidase
Protein isoelectric point: 4.8609
Protein molecular weight: 87290.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00534
Location and strand information: 89729 - 90655 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Melibiose operon regulatory protein

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00535
Location and strand information: 90863 - 91525 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00536
Location and strand information: 91541 - 92524 (+)
Family: 3.A.1.131.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00537
Location and strand information: 92517 - 93908 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00538
Location and strand information: 94033 - 95244 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00539
Location and strand information: 95291 - 96016 (-)
Family: 3.A.1.3.15
Protein type: TC
Protein description: Glutamine transport ATP-binding protein GlnQ

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00540
Location and strand information: 96003 - 96704 (-)
Family: 3.A.1.3.20
Protein type: TC
Protein description: Arginine transport system permease protein ArtQ

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00541
Location and strand information: 96780 - 97349 (-)
Family: 3.A.1.3.15
Protein type: TC
Protein description: Membrane-bound lytic murein transglycosylase F

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00542
Location and strand information: 97861 - 100437 (-)
Family: HisKA+HATPase_c+Response_reg+Response_reg
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00543
Location and strand information: 100599 - 100958 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004854_2|CGC3
Gene ID: MGYG000004854_00544
Location and strand information: 100995 - 102524 (-)
Family: 8.A.59.4.2
Protein type: TC
Protein description: Regulator of RpoS

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinoxylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004854_00533	Alpha-xylosidase	CAZyme	87281	89596	-	GH31
MGYG000004854_00534	Melibiose operon regulatory protein	TF	89729	90655	+	HTH_AraC+HTH_AraC
MGYG000004854_00535	hypothetical protein	null	90863	91525	+	No domain
MGYG000004854_00536	Vitamin B12 import ATP-binding protein BtuD	TC	91541	92524	+	3.A.1.131.1
MGYG000004854_00537	hypothetical protein	null	92517	93908	+	ABC2_membrane_2
MGYG000004854_00538	hypothetical protein	null	94033	95244	+	Metalloenzyme\| PhosphMutase
MGYG000004854_00539	Glutamine transport ATP-binding protein GlnQ	TC	95291	96016	-	3.A.1.3.15
MGYG000004854_00540	Arginine transport system permease protein ArtQ	TC	96003	96704	-	3.A.1.3.20
MGYG000004854_00541	Membrane-bound lytic murein transglycosylase F	TC	96780	97349	-	3.A.1.3.15
MGYG000004854_00542	Sensor histidine kinase RcsC	STP	97861	100437	-	HisKA\| HATPase_c\| Response_reg\| Response_reg
MGYG000004854_00543	hypothetical protein	null	100599	100958	-	Hpt
MGYG000004854_00544	Regulator of RpoS	TC	100995	102524	-	8.A.59.4.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature