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CAZyme Information: MGYG000000009_00836
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ligilactobacillus murinus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus murinus | |||||||||||
| CAZyme ID | MGYG000000009_00836 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 24036; End: 25424 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam10145 | PhageMin_Tail | 1.04e-15 | 310 | 456 | 1 | 133 | Phage-related minor tail protein. Members of this family are found in putative phage tail tape measure proteins. |
| COG5283 | COG5283 | 2.24e-15 | 1 | 422 | 3 | 401 | Phage-related tail protein [Mobilome: prophages, transposons]. |
| TIGR01760 | tape_meas_TP901 | 9.20e-12 | 300 | 456 | 31 | 173 | phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions] |
| TIGR02168 | SMC_prok_B | 0.001 | 2 | 149 | 789 | 932 | chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins] |
| COG1196 | Smc | 0.004 | 20 | 227 | 737 | 944 | Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ANK66596.1 | 2.37e-137 | 1 | 456 | 1 | 449 |
| ANK60023.1 | 3.21e-136 | 1 | 456 | 1 | 449 |
| ANK66921.1 | 3.21e-136 | 1 | 456 | 1 | 449 |
| ANK63359.1 | 5.05e-136 | 1 | 455 | 1 | 448 |
| ANK69636.1 | 5.05e-136 | 1 | 455 | 1 | 448 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E7DNB6 | 1.07e-06 | 299 | 456 | 85 | 228 | Tape measure protein OS=Pneumococcus phage Dp-1 OX=59241 GN=TMP PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000057 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |