dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000025_01492

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Species

Staphylococcus nepalensis

Lineage

Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus nepalensis

CAZyme ID

MGYG000000025_01492

CAZy Family

GH73

CAZyme Description

N-acetylmuramoyl-L-alanine amidase domain-containing protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
733	MGYG000000025_5\|CGC7	81887.51	4.245

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000025	2822370	Isolate	United Kingdom	Europe

Gene Location

Start: 220080; End: 222281 Strand: +

No EC number prediction in MGYG000000025_01492.

Family	Start	End	Evalue	family coverage
GH73	443	583	4.5e-27	0.984375

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK08581	PRK08581	0.0	1	731	1	619	amidase domain-containing protein.
COG1705	FlgJ	1.07e-52	434	587	42	188	Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
PRK06347	PRK06347	1.78e-38	353	587	60	303	1,4-beta-N-acetylmuramoylhydrolase.
COG3942	COG3942	2.59e-34	593	731	41	173	Surface antigen [Cell wall/membrane/envelope biogenesis].
smart00047	LYZ2	1.65e-29	429	584	2	142	Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATH58930.1	0.0	1	733	1	733
ATH64020.1	0.0	1	733	1	733
AWI43383.1	0.0	1	733	1	733
QKU19081.1	2.35e-259	1	733	1	731
QQV53078.1	4.08e-255	1	733	1	731

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5T1Q_A	5.94e-158	377	731	3	359	ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]
3FI7_A	1.50e-38	438	587	33	183	CrystalStructure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain [Listeria monocytogenes EGD-e]
2K3A_A	3.00e-18	620	728	52	152	ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]
2LRJ_A	2.16e-17	620	728	11	111	ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q2G222	2.52e-163	329	731	228	619	N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_02979 PE=1 SV=1
P39046	4.45e-32	434	587	61	214	Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1
Q9CIT4	3.87e-31	435	587	62	214	Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=acmA PE=3 SV=1
A2RHZ5	5.55e-30	438	587	65	214	Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=acmA PE=3 SV=1
P0C2T5	1.36e-29	435	587	62	214	Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris OX=1359 GN=acmA PE=3 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000307	0.999006	0.000205	0.000173	0.000159	0.000137

There is no transmembrane helices in MGYG000000025_01492.