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CAZyme Information: MGYG000000044_01189
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Parabacteroides merdae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides merdae | |||||||||||
| CAZyme ID | MGYG000000044_01189 | |||||||||||
| CAZy Family | GH106 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 292787; End: 296014 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH106 | 342 | 1071 | 3.8e-226 | 0.8871359223300971 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam17132 | Glyco_hydro_106 | 0.0 | 34 | 869 | 2 | 867 | alpha-L-rhamnosidase. |
| PRK10150 | PRK10150 | 0.006 | 954 | 1027 | 58 | 133 | beta-D-glucuronidase; Provisional |
| cd03143 | A4_beta-galactosidase_middle_domain | 0.009 | 689 | 797 | 39 | 130 | A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT50381.1 | 0.0 | 1 | 1075 | 1 | 1075 |
| QGA23785.1 | 0.0 | 1 | 1074 | 1 | 1081 |
| BBL00916.1 | 0.0 | 5 | 1072 | 4 | 1075 |
| BBL11634.1 | 0.0 | 5 | 1072 | 4 | 1075 |
| BBL08842.1 | 0.0 | 5 | 1072 | 4 | 1075 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6Q2F_A | 5.35e-149 | 27 | 1071 | 41 | 1138 | Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y] |
| 5MQM_A | 4.61e-113 | 8 | 1075 | 13 | 1102 | Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron] |
| 5MWK_A | 1.22e-112 | 8 | 1075 | 13 | 1102 | Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron] |
| 6D8K_A | 1.80e-07 | 951 | 1026 | 88 | 165 | Bacteroidesmultiple species beta-glucuronidase [Bacteroides ovatus],6D8K_B Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus],6D8K_C Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus],6D8K_D Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus] |
| 6D89_A | 1.22e-06 | 952 | 1026 | 90 | 166 | Bacteroidesuniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_B Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_C Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_D Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| T2KNA8 | 7.14e-131 | 28 | 1071 | 30 | 1155 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000669 | 0.995704 | 0.003010 | 0.000230 | 0.000190 | 0.000167 |