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CAZyme Information: MGYG000000055_02078

You are here: Home > Sequence: MGYG000000055_02078

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Muribaculum intestinale
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Muribaculum; Muribaculum intestinale
CAZyme ID MGYG000000055_02078
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
260 MGYG000000055_28|CGC1 29259.15 5.532
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000055 3235245 Isolate United Kingdom Europe
Gene Location Start: 3284;  End: 4066  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000055_02078.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 76 260 1.6e-19 0.37538461538461537

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.12e-29 38 260 66 273
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 9.24e-06 6 162 2 175
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASB37320.1 4.19e-160 36 260 1 225
ARE60831.1 4.19e-160 36 260 1 225
QCD41743.1 5.92e-64 25 259 29 265
QCP71949.1 1.72e-63 25 259 30 266
QCD38261.1 1.72e-63 25 259 30 266

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 3.99e-26 36 259 15 224
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 9.03e-19 33 256 29 231
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 5.25e-12 49 178 157 290
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000414 0.998884 0.000229 0.000158 0.000150 0.000149

TMHMM  Annotations      download full data without filtering help

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