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CAZyme Information: MGYG000000055_02252

You are here: Home > Sequence: MGYG000000055_02252

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Muribaculum intestinale
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Muribaculum; Muribaculum intestinale
CAZyme ID MGYG000000055_02252
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
992 MGYG000000055_34|CGC2 106723.92 9.4086
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000055 3235245 Isolate United Kingdom Europe
Gene Location Start: 16127;  End: 19105  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000055_02252.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 105 327 8.2e-54 0.9675925925925926

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 1.65e-70 92 444 46 377
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 3.02e-69 50 363 2 315
Glycosyl hydrolase family 3 N terminal domain.
PRK03642 PRK03642 1.89e-53 569 963 29 395
putative periplasmic esterase; Provisional
COG1680 AmpC 7.05e-42 597 991 54 386
CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].
pfam00144 Beta-lactamase 1.28e-39 584 977 2 322
Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASB36988.1 0.0 1 992 1 992
ANU62524.1 0.0 1 992 1 992
QQR10146.1 0.0 1 992 1 992
QCD35538.1 0.0 22 991 23 990
AHF12964.1 2.03e-285 12 990 9 987

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3SQL_A 1.56e-56 75 381 47 361
CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]
3BMX_A 1.29e-54 32 425 24 458
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
4GYJ_A 6.45e-54 32 425 28 462
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3LK6_A 7.02e-54 48 425 16 432
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
6K5J_A 1.14e-52 48 365 11 337
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 7.07e-54 32 425 24 458
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 2.71e-48 46 414 26 425
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
P77619 6.14e-38 565 963 25 395
Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
B4TD53 1.08e-37 565 963 25 395
Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella heidelberg (strain SL476) OX=454169 GN=yfeW PE=3 SV=1
Q8ZN80 1.97e-37 565 963 25 395
Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000625 0.998708 0.000165 0.000168 0.000152 0.000156

TMHMM  Annotations      download full data without filtering help

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