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CAZyme Information: MGYG000000062_02054

You are here: Home > Sequence: MGYG000000062_02054

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Intestinibacter bartlettii
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Intestinibacter; Intestinibacter bartlettii
CAZyme ID MGYG000000062_02054
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2011 MGYG000000062_3|CGC2 226268.58 4.8651
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000062 3140386 Isolate United Kingdom Europe
Gene Location Start: 94819;  End: 100854  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000062_02054.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 1621 1760 3.4e-38 0.9925373134328358
CBM51 1398 1536 1.1e-37 0.9850746268656716
CBM51 883 1018 5.7e-34 0.9850746268656716
CBM32 1131 1254 7.4e-16 0.9112903225806451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 6.76e-48 1620 1761 2 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305 NPCBM 1.85e-45 880 1019 1 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305 NPCBM 2.17e-44 1396 1537 1 135
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 9.76e-41 1620 1761 4 145
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
smart00776 NPCBM 1.00e-35 1395 1537 2 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AQM59432.1 0.0 71 2008 497 2443
QJS19250.1 0.0 88 2006 515 2286
AMN35289.1 1.39e-296 71 1994 491 2141
AWE07805.1 1.49e-296 88 2010 287 1925
CEJ73532.1 5.28e-295 70 1318 265 1492

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JS4_A 5.76e-141 321 1765 47 980
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JRM_A 1.51e-127 1541 2007 4 462
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JRL_A 3.10e-127 1541 2007 26 484
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JFS_A 8.19e-111 88 801 268 981
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
5KDJ_A 3.02e-93 231 879 24 672
ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P42548 3.96e-06 1337 1637 396 641
Uncharacterized 81.3 kDa protein OS=Acholeplasma phage L2 OX=46014 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000260 0.999099 0.000162 0.000174 0.000157 0.000146

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000062_02054.