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CAZyme Information: MGYG000000079_02037

You are here: Home > Sequence: MGYG000000079_02037

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Exiguobacterium sp902362975
Lineage Bacteria; Firmicutes; Bacilli; Exiguobacterales; Exiguobacteraceae; Exiguobacterium; Exiguobacterium sp902362975
CAZyme ID MGYG000000079_02037
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
230 MGYG000000079_28|CGC1 26095.08 4.8174
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000079 2825544 Isolate United Kingdom Europe
Gene Location Start: 19498;  End: 20190  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000079_02037.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 62 200 7e-19 0.837037037037037

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd13399 Slt35-like 5.46e-22 60 191 1 103
Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
COG2951 MltB 4.50e-07 44 163 107 240
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
cd13403 MLTF-like 0.007 54 198 2 160
membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins. This subfamily includes membrane-bound lytic murein transglycosylase F (MltF, murein lyase F) that degrades murein glycan strands. It is responsible for catalyzing the release of 1,6-anhydromuropeptides from peptidoglycan. Lytic transglycosylase catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do goose-type lysozymes. However, in addition, it also makes a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACQ69264.1 3.05e-169 1 230 1 230
QPI69013.1 1.24e-168 1 230 1 230
QUP88467.1 1.24e-168 1 230 1 230
QUE87803.1 3.98e-126 13 229 2 218
ASI35177.1 7.44e-74 3 201 2 200

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.768620 0.219695 0.009503 0.000486 0.000384 0.001323

TMHMM  Annotations      download full data without filtering help

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