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CAZyme Information: MGYG000000081_00926

You are here: Home > Sequence: MGYG000000081_00926

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium propinquum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium propinquum
CAZyme ID MGYG000000081_00926
CAZy Family CE14
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
257 MGYG000000081_3|CGC3 28272.69 4.7947
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000081 2502902 Isolate United Kingdom Europe
Gene Location Start: 228394;  End: 229167  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000081_00926.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE14 38 141 4.3e-23 0.9112903225806451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02585 PIG-L 4.98e-27 39 160 1 121
GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.
COG2120 LmbE 6.64e-23 36 160 12 131
N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism].
cd06268 PBP1_ABC_transporter_LIVBP-like 0.006 19 154 74 211
periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily. Periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type 1 periplasmic binding fold protein superfamily. They are mostly present in archaea and eubacteria, and are primarily involved in scavenging solutes from the environment. ABC-type transporters couple ATP hydrolysis with the uptake and efflux of a wide range of substrates across bacterial membranes, including amino acids, peptides, lipids and sterols, and various drugs. These systems are comprised of transmembrane domains, nucleotide binding domains, and in most bacterial uptake systems, periplasmic binding proteins (PBPs) which transfer the ligand to the extracellular gate of the transmembrane domains. These PBPs bind their substrates selectively and with high affinity. Members of this group include ABC-type Leucine-Isoleucine-Valine-Binding Proteins (LIVBP), which are homologous to the aliphatic amidase transcriptional repressor, AmiC, of Pseudomonas aeruginosa. The uncharacterized periplasmic components of various ABC-type transport systems are included in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
UAC00209.1 4.32e-35 35 225 13 203
QFY06193.1 8.42e-31 33 237 6 213
AQZ66804.1 1.78e-29 32 235 5 211
SBO92168.1 1.91e-28 32 191 5 171
QSI47321.1 7.38e-28 29 227 2 206

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5BMO_A 6.98e-47 29 229 9 214
LnmXprotein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus [Streptomyces atroolivaceus],5BMO_B LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus [Streptomyces atroolivaceus],5BMO_C LnmX protein, a putative GlcNAc-PI de-N-acetylase from Streptomyces atroolivaceus [Streptomyces atroolivaceus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000009 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000081_00926.