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CAZyme Information: MGYG000000095_01448

You are here: Home > Sequence: MGYG000000095_01448

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066755 sp902363085
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp902363085
CAZyme ID MGYG000000095_01448
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
687 MGYG000000095_3|CGC8 75553.85 4.4549
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000095 5524222 Isolate United Kingdom Europe
Gene Location Start: 396487;  End: 398550  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000095_01448.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 207 484 4.8e-37 0.7446153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.70e-07 221 358 223 352
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 5.70e-04 239 447 87 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02155 PLN02155 0.006 230 319 137 228
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMV67078.1 1.56e-228 29 687 24 664
QNK57056.1 2.82e-169 51 505 42 493
QNK57052.1 8.20e-161 63 686 47 647
AZS17008.1 5.30e-160 51 505 60 509
QJD84920.1 2.15e-156 51 505 37 488

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000274 0.998925 0.000227 0.000196 0.000174 0.000152

TMHMM  Annotations      download full data without filtering help

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