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CAZyme Information: MGYG000000105_00824
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides clarus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus | |||||||||||
| CAZyme ID | MGYG000000105_00824 | |||||||||||
| CAZy Family | GH30 | |||||||||||
| CAZyme Description | Glucuronoxylanase XynC | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 866882; End: 868210 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH30 | 45 | 383 | 9.3e-112 | 0.9532163742690059 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5520 | XynC | 2.55e-68 | 34 | 407 | 25 | 398 | O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]. |
| pfam02055 | Glyco_hydro_30 | 4.50e-07 | 55 | 243 | 1 | 236 | Glycosyl hydrolase family 30 TIM-barrel domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIU93962.1 | 9.47e-237 | 8 | 441 | 5 | 438 |
| ADY53099.1 | 8.95e-97 | 25 | 404 | 102 | 475 |
| QDH81064.1 | 1.66e-88 | 32 | 441 | 141 | 541 |
| ACS85921.1 | 2.03e-78 | 27 | 380 | 17 | 355 |
| AFN75320.1 | 1.69e-77 | 46 | 380 | 248 | 577 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1NOF_A | 6.22e-73 | 46 | 380 | 5 | 325 | ChainA, xylanase [Dickeya chrysanthemi],2Y24_A Chain A, XYLANASE [Dickeya chrysanthemi] |
| 4UQA_A | 3.70e-58 | 42 | 392 | 22 | 365 | ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus] |
| 4CKQ_A | 2.00e-57 | 42 | 392 | 22 | 365 | ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQ9_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQB_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQC_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQD_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],4UQE_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus] |
| 5CXP_A | 6.75e-57 | 46 | 377 | 8 | 325 | X-raycrystallographic protein structure of the glycoside hydrolase family 30 subfamily 8 xylanase, Xyn30A, from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824] |
| 5A6L_A | 1.51e-56 | 42 | 392 | 22 | 365 | ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],5A6M_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus ATCC 27405] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q45070 | 1.35e-51 | 35 | 377 | 27 | 359 | Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1 |
| Q6YK37 | 4.04e-49 | 37 | 382 | 30 | 365 | Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2 |
| Q7M4T0 | 6.55e-06 | 23 | 279 | 62 | 331 | Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=neg-1 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001483 | 0.983372 | 0.014407 | 0.000261 | 0.000236 | 0.000220 |