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CAZyme Information: MGYG000000105_01143
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides clarus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus | |||||||||||
| CAZyme ID | MGYG000000105_01143 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Xylan 1,4-beta-xylosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 270614; End: 273208 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 58 | 303 | 5.2e-69 | 0.9768518518518519 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15098 | PRK15098 | 1.32e-119 | 9 | 853 | 9 | 756 | beta-glucosidase BglX. |
| PLN03080 | PLN03080 | 1.76e-115 | 26 | 823 | 44 | 744 | Probable beta-xylosidase; Provisional |
| COG1472 | BglX | 1.31e-68 | 60 | 402 | 57 | 366 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| pfam01915 | Glyco_hydro_3_C | 2.05e-52 | 374 | 746 | 1 | 216 | Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
| pfam00933 | Glyco_hydro_3 | 1.71e-47 | 35 | 332 | 39 | 314 | Glycosyl hydrolase family 3 N terminal domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQY38970.1 | 0.0 | 1 | 863 | 1 | 863 |
| ABR38853.1 | 0.0 | 1 | 863 | 1 | 863 |
| QUT60218.1 | 0.0 | 1 | 863 | 1 | 863 |
| ALK83519.1 | 0.0 | 1 | 863 | 1 | 863 |
| QQY42186.1 | 0.0 | 1 | 863 | 1 | 863 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5Z87_A | 2.21e-87 | 13 | 861 | 25 | 784 | ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus] |
| 7VC7_A | 4.68e-86 | 15 | 750 | 6 | 601 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 7VC6_A | 4.68e-86 | 15 | 750 | 6 | 601 | ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium] |
| 5TF0_A | 6.07e-78 | 60 | 862 | 80 | 751 | CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393] |
| 6R5I_A | 1.56e-77 | 80 | 861 | 83 | 732 | ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5EY15 | 6.54e-307 | 7 | 863 | 6 | 861 | Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1 |
| Q9SGZ5 | 1.18e-94 | 33 | 821 | 47 | 730 | Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2 |
| T2KMH0 | 2.27e-94 | 18 | 861 | 17 | 720 | Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1 |
| Q94KD8 | 2.34e-94 | 33 | 864 | 53 | 766 | Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1 |
| Q9LJN4 | 1.16e-90 | 14 | 856 | 31 | 765 | Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000267 | 0.999147 | 0.000140 | 0.000156 | 0.000137 | 0.000131 |