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CAZyme Information: MGYG000000105_01454
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides clarus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus | |||||||||||
| CAZyme ID | MGYG000000105_01454 | |||||||||||
| CAZy Family | PL13 | |||||||||||
| CAZyme Description | Heparin lyase I | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 682643; End: 683827 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL13 | 26 | 393 | 2e-207 | 0.9889807162534435 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14099 | Polysacc_lyase | 3.17e-16 | 54 | 382 | 9 | 201 | Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT44448.1 | 1.41e-286 | 1 | 394 | 1 | 394 |
| QRQ49642.1 | 3.33e-285 | 1 | 394 | 1 | 394 |
| ADL62736.1 | 1.99e-281 | 1 | 389 | 1 | 389 |
| QRQ56254.1 | 7.63e-254 | 1 | 393 | 1 | 391 |
| SCV08896.1 | 7.63e-254 | 1 | 393 | 1 | 391 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3IMN_A | 1.02e-249 | 20 | 393 | 2 | 375 | Crystalstructure of heparin lyase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron],3IN9_A Crystal structure of heparin lyase I complexed with disaccharide heparin [Bacteroides thetaiotaomicron] |
| 3IKW_A | 1.45e-248 | 21 | 393 | 1 | 373 | Structureof Heparinase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron] |
| 3INA_A | 3.39e-248 | 20 | 393 | 2 | 375 | Crystalstructure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin [Bacteroides thetaiotaomicron] |
| 3ILR_A | 4.85e-246 | 25 | 393 | 1 | 369 | Structureof Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q05819 | 1.17e-177 | 36 | 393 | 32 | 381 | Heparin lyase I OS=Pedobacter heparinus OX=984 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000312 | 0.171057 | 0.828238 | 0.000161 | 0.000137 | 0.000092 |