dbCAN-seq: a database of CAZyme sequence and annotation

You are browsing environment: HUMAN GUT

help

CAZyme Information: MGYG000000108_00635

You are here: Home > Sequence: MGYG000000108_00635

Species

Citrobacter freundii

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii

CAZyme ID

MGYG000000108_00635

CAZy Family

GH73

CAZyme Description

Peptidoglycan hydrolase FlgJ

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
316	MGYG000000108_1\|CGC6	34537.08	9.2751

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000108	4739906	Isolate	Canada	North America

Gene Location

Start: 664069; End: 665019 Strand: -

No EC number prediction in MGYG000000108_00635.

Family	Start	End	Evalue	family coverage
GH73	164	297	6.7e-34	0.9375

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK05684	flgJ	5.99e-169	2	312	1	312	flagellar assembly peptidoglycan hydrolase FlgJ.
TIGR02541	flagell_FlgJ	2.25e-130	11	298	1	294	flagellar rod assembly protein/muramidase FlgJ. The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.
PRK12709	flgJ	3.82e-74	12	297	15	319	flagellar rod assembly protein/muramidase FlgJ; Provisional
PRK12712	flgJ	4.24e-73	12	299	17	344	flagellar rod assembly protein/muramidase FlgJ; Provisional
PRK12713	flgJ	5.36e-70	11	299	15	328	flagellar rod assembly protein/muramidase FlgJ; Provisional

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QSF23148.1	1.88e-222	1	316	1	316
AYL56126.1	1.88e-222	1	316	1	316
QSB97293.1	2.19e-221	1	316	1	316
QHX03564.1	2.19e-221	1	316	1	316
QNC74780.1	2.19e-221	1	316	1	316

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5DN4_A	1.79e-102	151	316	2	167	Structureof the glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
5DN5_A	6.42e-92	151	301	2	152	Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
3VWO_A	5.20e-39	163	294	12	143	Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1]
2ZYC_A	6.78e-39	163	294	13	144	ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1]
3K3T_A	5.27e-38	163	294	13	144	E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P15931	2.33e-201	1	316	1	316	Peptidoglycan hydrolase FlgJ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=flgJ PE=1 SV=1
P75942	1.52e-187	1	316	1	313	Peptidoglycan hydrolase FlgJ OS=Escherichia coli (strain K12) OX=83333 GN=flgJ PE=3 SV=1
P58231	5.08e-186	1	316	1	313	Peptidoglycan hydrolase FlgJ OS=Escherichia coli O157:H7 OX=83334 GN=flgJ PE=3 SV=1
Q9I4P4	1.25e-44	14	299	20	387	Peptidoglycan hydrolase FlgJ OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=flgJ PE=3 SV=1
Q9KQ15	2.16e-44	14	301	13	310	Peptidoglycan hydrolase FlgJ OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=flgJ PE=3 SV=2

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000072	0.000000	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000000108_00635.