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CAZyme Information: MGYG000000113_01874

You are here: Home > Sequence: MGYG000000113_01874

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus salivarius
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus salivarius
CAZyme ID MGYG000000113_01874
CAZy Family GH87
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1112 117132.54 4.2892
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000113 2251845 Isolate Canada North America
Gene Location Start: 31911;  End: 35249  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000113_01874.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH87 54 658 8.1e-144 0.9413735343383585

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14490 CBM6-CBM35-CBM36_like_1 1.44e-34 141 294 1 156
uncharacterized members of the carbohydrate binding module 6 (CBM6) and CBM35_like superfamily. Carbohydrate binding module family 6 (CBM6, family 6 CBM), also known as cellulose binding domain family VI (CBD VI), and related CBMs (CBM35 and CBM36). These are non-catalytic carbohydrate binding domains found in a range of enzymes that display activities against a diverse range of carbohydrate targets, including mannan, xylan, beta-glucans, cellulose, agarose, and arabinans. These domains facilitate the strong binding of the appended catalytic modules to their dedicated, insoluble substrates. Many of these CBMs are associated with glycoside hydrolase (GH) domains. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold. CBM36s are calcium-dependent xylan binding domains. CBM35s display conserved specificity through extensive sequence similarity, but divergent function through their appended catalytic modules.
pfam05109 Herpes_BLLF1 1.18e-12 650 942 477 762
Herpes virus major outer envelope glycoprotein (BLLF1). This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
PHA03307 PHA03307 1.06e-08 659 927 136 394
transcriptional regulator ICP4; Provisional
pfam13229 Beta_helix 1.40e-08 450 644 4 157
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PHA03307 PHA03307 3.05e-07 659 935 111 387
transcriptional regulator ICP4; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCB95088.1 0.0 1 1112 1 1112
ARI57509.1 0.0 1 1112 1 1084
SQF76210.1 0.0 1 1112 1 1098
AEJ53682.1 0.0 1 1112 1 1098
QGU82859.1 0.0 1 1112 1 1084

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5ZRU_A 9.20e-125 141 657 13 531
ChainA, Alpha-1,3-glucanase [Niallia circulans],5ZRU_C Chain C, Alpha-1,3-glucanase [Niallia circulans]
7C7D_A 1.71e-50 141 660 54 537
Crystalstructure of the catalytic unit of thermostable GH87 alpha-1,3-glucanase from Streptomyces thermodiastaticus strain HF3-3 [Streptomyces thermodiastaticus],7C7D_B Crystal structure of the catalytic unit of thermostable GH87 alpha-1,3-glucanase from Streptomyces thermodiastaticus strain HF3-3 [Streptomyces thermodiastaticus]
6K0M_A 5.83e-31 139 583 12 443
Catalyticdomain of GH87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11 [Paenibacillus glycanilyticus],6K0N_A Catalytic domain of GH87 alpha-1,3-glucanase in complex with nigerose [Paenibacillus glycanilyticus]
6K0P_A 5.84e-30 139 583 12 443
Catalyticdomain of GH87 alpha-1,3-glucanase D1045A in complex with nigerose [Paenibacillus glycanilyticus]
6K0S_A 5.84e-30 139 583 12 443
Catalyticdomain of GH87 alpha-1,3-glucanase D1069A in complex with nigerose [Paenibacillus glycanilyticus],6K0V_A Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus],6K0V_B Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus],6K0V_C Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus],6K0V_D Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides [Paenibacillus glycanilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000463 0.998610 0.000370 0.000199 0.000175 0.000151

TMHMM  Annotations      download full data without filtering help

start end
1084 1103