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CAZyme Information: MGYG000000127_00303
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Catenibacillus sp902363555 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Catenibacillus; Catenibacillus sp902363555 | |||||||||||
| CAZyme ID | MGYG000000127_00303 | |||||||||||
| CAZy Family | GH39 | |||||||||||
| CAZyme Description | HTH-type transcriptional activator RhaS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 380439; End: 382880 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH39 | 326 | 759 | 1.4e-47 | 0.9767981438515081 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2207 | AraC | 2.92e-28 | 164 | 269 | 19 | 124 | AraC-type DNA-binding domain and AraC-containing proteins [Transcription]. |
| pfam01229 | Glyco_hydro_39 | 5.83e-27 | 331 | 671 | 18 | 356 | Glycosyl hydrolases family 39. |
| COG3664 | XynB | 1.54e-25 | 343 | 773 | 1 | 389 | Beta-xylosidase [Carbohydrate transport and metabolism]. |
| smart00342 | HTH_ARAC | 3.85e-24 | 181 | 264 | 1 | 84 | helix_turn_helix, arabinose operon control protein. |
| pfam12833 | HTH_18 | 3.81e-23 | 187 | 266 | 1 | 81 | Helix-turn-helix domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGF58069.1 | 4.76e-113 | 30 | 811 | 35 | 845 |
| AQR96759.1 | 6.95e-112 | 30 | 811 | 35 | 845 |
| QCX34311.1 | 8.23e-108 | 3 | 811 | 9 | 831 |
| AQR96747.1 | 2.39e-102 | 13 | 811 | 17 | 840 |
| AQR96727.1 | 1.85e-95 | 34 | 808 | 30 | 790 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4M29_A | 5.63e-27 | 335 | 810 | 30 | 498 | Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15] |
| 4EKJ_A | 7.53e-27 | 335 | 810 | 30 | 498 | ChainA, Beta-xylosidase [Caulobacter vibrioides] |
| 6YYH_A | 1.67e-24 | 326 | 809 | 36 | 503 | Crystalstructure of beta-D-xylosidase from Dictyoglomus thermophilum in ligand-free form [Dictyoglomus thermophilum H-6-12],6YYH_B Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum in ligand-free form [Dictyoglomus thermophilum H-6-12],6YYI_A Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum bound to beta-D-xylopyranose [Dictyoglomus thermophilum H-6-12],6YYI_B Crystal structure of beta-D-xylosidase from Dictyoglomus thermophilum bound to beta-D-xylopyranose [Dictyoglomus thermophilum H-6-12] |
| 6UQJ_A | 4.60e-22 | 339 | 810 | 39 | 505 | Crystalstructure of the GH39 enzyme from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306] |
| 3OOU_A | 7.28e-12 | 167 | 265 | 7 | 105 | Thestructure of a protein with unkown function from Listeria innocua [Listeria innocua] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q936F1 | 1.48e-21 | 110 | 808 | 104 | 739 | Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2 |
| Q6GKK1 | 1.37e-20 | 105 | 808 | 99 | 739 | Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1 |
| Q8NYT6 | 4.14e-20 | 105 | 808 | 99 | 739 | Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1 |
| Q6GD21 | 4.14e-20 | 105 | 808 | 99 | 739 | Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1 |
| Q7A882 | 5.46e-20 | 105 | 808 | 99 | 739 | Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000039 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |