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CAZyme Information: MGYG000000143_02404

You are here: Home > Sequence: MGYG000000143_02404

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Turicibacter sanguinis
Lineage Bacteria; Firmicutes; Bacilli; Haloplasmatales_A; Turicibacteraceae; Turicibacter; Turicibacter sanguinis
CAZyme ID MGYG000000143_02404
CAZy Family GT2
CAZyme Description Ubiquinone biosynthesis O-methyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1048 MGYG000000143_19|CGC1 122110.07 5.3313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000143 2958073 Isolate United Kingdom Europe
Gene Location Start: 5010;  End: 8156  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000143_02404.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT2 422 542 6.4e-24 0.7294117647058823

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04186 GT_2_like_c 1.67e-42 423 632 1 166
Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
COG1216 GT2 1.73e-40 418 637 2 226
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
cd03801 GT4_PimA-like 4.37e-28 686 1040 1 358
phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
pfam13692 Glyco_trans_1_4 2.37e-27 877 1015 1 138
Glycosyl transferases group 1.
pfam08241 Methyltransf_11 9.69e-26 39 134 1 94
Methyltransferase domain. Members of this family are SAM dependent methyltransferases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIQ55096.1 0.0 1 1048 1 1082
BAU26503.1 0.0 1 1046 1 1064
QFG01088.1 0.0 1 1048 1 1084
QGQ98489.1 0.0 1 1047 1 1095
QUC66670.1 0.0 3 1047 168 1320

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3L8D_A 4.65e-11 34 130 53 147
Crystalstructure of methyltransferase from Bacillus Thuringiensis [Bacillus thuringiensis str. Al Hakam]
1VE3_A 9.08e-11 38 145 42 152
Crystalstructure of PH0226 protein from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii],1VE3_B Crystal structure of PH0226 protein from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii]
3BCV_A 7.16e-09 419 512 5 100
Crystalstructure of a putative glycosyltransferase from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3BCV_B Crystal structure of a putative glycosyltransferase from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
1WZN_A 2.94e-06 38 137 45 146
CrystalStructure of the SAM-dependent methyltransferase from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii OT3],1WZN_B Crystal Structure of the SAM-dependent methyltransferase from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii OT3],1WZN_C Crystal Structure of the SAM-dependent methyltransferase from Pyrococcus horikoshii OT3 [Pyrococcus horikoshii OT3]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P9WJZ0 4.32e-19 1 143 28 166
Probable S-adenosylmethionine-dependent methyltransferase MT3114 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT3114 PE=3 SV=1
P9WJZ1 4.32e-19 1 143 28 166
Probable S-adenosylmethionine-dependent methyltransferase Rv3030 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv3030 PE=1 SV=1
A0QUV5 1.17e-17 1 143 12 150
Probable S-adenosylmethionine-dependent methyltransferase MSMEG_2350/MSMEI_2290 OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_2350 PE=1 SV=1
P55465 1.20e-13 419 637 625 852
Uncharacterized protein y4gI OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03550 PE=4 SV=1
A8Y236 1.68e-11 419 674 164 434
Putative polypeptide N-acetylgalactosaminyltransferase 10 OS=Caenorhabditis briggsae OX=6238 GN=gly-10 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000143_02404.