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CAZyme Information: MGYG000000158_00394
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Collinsella sp003436275 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275 | |||||||||||
| CAZyme ID | MGYG000000158_00394 | |||||||||||
| CAZy Family | CBM13 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 118024; End: 121587 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM13 | 214 | 358 | 1e-21 | 0.6542553191489362 |
| CBM13 | 766 | 898 | 9e-21 | 0.675531914893617 |
| CBM13 | 898 | 996 | 6.7e-20 | 0.5053191489361702 |
| CBM13 | 584 | 687 | 1.7e-17 | 0.5212765957446809 |
| CBM13 | 429 | 507 | 7.1e-16 | 0.40425531914893614 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14200 | RicinB_lectin_2 | 3.56e-20 | 892 | 980 | 2 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| pfam14200 | RicinB_lectin_2 | 5.26e-20 | 455 | 545 | 1 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| pfam13529 | Peptidase_C39_2 | 1.27e-19 | 1006 | 1159 | 2 | 138 | Peptidase_C39 like family. |
| pfam14200 | RicinB_lectin_2 | 3.56e-18 | 295 | 383 | 1 | 89 | Ricin-type beta-trefoil lectin domain-like. |
| NF035929 | lectin_1 | 2.36e-17 | 298 | 506 | 654 | 834 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRT49575.1 | 8.97e-187 | 404 | 1187 | 270 | 1061 |
| BAK44091.1 | 7.39e-74 | 248 | 997 | 131 | 885 |
| QRT49576.1 | 5.34e-48 | 403 | 914 | 412 | 928 |
| QOL34941.1 | 3.45e-24 | 102 | 471 | 614 | 982 |
| AMK55176.1 | 9.44e-23 | 99 | 472 | 516 | 889 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000731 | 0.998011 | 0.000655 | 0.000207 | 0.000185 | 0.000184 |
