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CAZyme Information: MGYG000000158_01936

You are here: Home > Sequence: MGYG000000158_01936

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003436275
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003436275
CAZyme ID MGYG000000158_01936
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
318 34926.18 4.7075
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000158 2308547 Isolate China Asia
Gene Location Start: 5991;  End: 6947  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000158_01936.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 41 191 3.2e-25 0.9921875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 1.77e-25 221 299 1 84
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
COG0791 Spr 3.26e-23 204 307 70 182
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
COG1705 FlgJ 4.72e-23 40 195 49 188
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
NF033741 NlpC_p60_RipA 9.15e-22 216 305 335 440
NlpC/P60 family peptidoglycan endopeptidase RipA.
NF033742 NlpC_p60_RipB 1.80e-20 196 299 60 183
NlpC/P60 family peptidoglycan endopeptidase RipB.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34838.1 9.85e-234 2 318 208 524
ATP54961.1 2.68e-231 2 318 208 524
CBL05254.1 1.34e-167 2 318 209 525
AJC12020.1 2.35e-166 2 315 212 525
AWG17013.1 4.72e-166 2 315 212 525

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6B8C_A 1.53e-18 206 306 25 130
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
2XIV_A 1.50e-17 212 305 83 192
Structureof Rv1477, hypothetical invasion protein of Mycobacterium tuberculosis [Mycobacterium tuberculosis H37Rv]
3NE0_A 1.65e-17 212 305 88 197
Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv]
3PBC_A 1.65e-17 212 305 88 197
ChainA, Invasion Protein [Mycobacterium tuberculosis]
3S0Q_A 3.00e-16 212 305 89 198
ChainA, INVASION PROTEIN [Mycobacterium tuberculosis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13692 6.13e-16 206 306 399 504
Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2
A0QX22 7.97e-16 212 305 371 480
Peptidoglycan endopeptidase RipA OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=ripA PE=1 SV=1
O53168 1.01e-15 212 305 346 455
Peptidoglycan endopeptidase RipA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ripA PE=1 SV=1
P67474 2.68e-14 211 304 275 370
Probable endopeptidase Mb2213c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2213C PE=3 SV=1
P9WHU3 2.68e-14 211 304 275 370
Probable endopeptidase Rv2190c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2190c PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.901887 0.097038 0.000652 0.000182 0.000092 0.000162

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000158_01936.