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CAZyme Information: MGYG000000159_03009

You are here: Home > Sequence: MGYG000000159_03009

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sellimonas intestinalis
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Sellimonas; Sellimonas intestinalis
CAZyme ID MGYG000000159_03009
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1326 144128.56 4.7751
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000159 3206639 Isolate China Asia
Gene Location Start: 14919;  End: 18899  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000159_03009.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5280 YqbO 6.81e-70 1 710 1 634
Phage-related minor tail protein [Mobilome: prophages, transposons].
cd13402 LT_TF-like 4.07e-48 1115 1202 1 90
lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
COG3953 SLT 1.06e-28 1115 1202 15 112
SLT domain protein [Mobilome: prophages, transposons].
COG5283 COG5283 2.81e-19 22 1079 19 1172
Phage-related tail protein [Mobilome: prophages, transposons].
COG5412 COG5412 9.05e-19 595 974 198 566
Phage-related protein [Mobilome: prophages, transposons].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRT50199.1 7.09e-108 897 1209 1240 1552
QQV81699.1 1.01e-63 247 1214 282 1389
QPB60503.1 9.76e-63 167 1259 197 1316
AFM69111.1 1.56e-59 897 1272 1629 2084
QQY22090.1 1.56e-59 897 1272 1629 2084

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P54334 1.98e-15 1036 1214 1027 1218
Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2
P45931 1.06e-14 1090 1214 1343 1470
Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
598 620
627 649
736 758
771 793