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CAZyme Information: MGYG000000187_00555

You are here: Home > Sequence: MGYG000000187_00555

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp003537285
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp003537285
CAZyme ID MGYG000000187_00555
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2217 242737.89 4.5225
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000187 2804290 Isolate China Asia
Gene Location Start: 10986;  End: 17639  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000187_00555.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1118 1403 5.3e-75 0.9652777777777778
PL1 1548 1788 1.3e-40 0.8168316831683168

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 2.29e-36 1111 1397 88 395
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02432 PLN02432 1.17e-35 1123 1405 23 287
putative pectinesterase
PLN02773 PLN02773 2.36e-33 1116 1404 10 296
pectinesterase
smart00656 Amb_all 7.19e-31 1552 1742 15 160
Amb_all domain.
PLN02682 PLN02682 4.85e-30 1123 1350 82 306
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADD62022.1 0.0 8 2168 136 2326
QEH70392.1 0.0 583 1889 463 1755
ACZ98653.1 0.0 620 1889 90 1350
ACR72234.1 1.12e-135 655 1405 307 1066
QJS18636.1 2.87e-79 1452 1887 243 673

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GT5_A 2.24e-74 1449 1887 2 446
Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602]
2NSP_A 5.61e-37 1099 1408 2 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
2NTB_A 5.04e-33 1099 1408 2 339
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 5.04e-33 1099 1408 2 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]
5C1E_A 9.86e-22 1111 1351 14 241
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D3JTC2 6.25e-70 1449 1785 31 366
Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1
P0C1A8 3.42e-32 1099 1408 26 363
Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1
P0C1A9 4.62e-32 1099 1408 26 363
Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1
Q9ZQA3 2.39e-24 1117 1418 95 396
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1
Q9FM79 2.85e-24 1125 1351 94 318
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000020 0.000020 0.000002 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
2187 2209