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CAZyme Information: MGYG000000207_01253

You are here: Home > Sequence: MGYG000000207_01253

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp002232035
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp002232035
CAZyme ID MGYG000000207_01253
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
906 MGYG000000207_5|CGC5 98330.73 4.6707
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000207 2229433 Isolate China Asia
Gene Location Start: 142024;  End: 144744  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000207_01253.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 837 5.3e-67 0.9150485436893204

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.005 393 563 566 732
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH68834.1 0.0 1 858 1 858
ATP54541.1 0.0 13 858 4 845
QNM10672.1 7.13e-312 1 857 1 828
AGF57028.1 7.99e-246 8 856 7 840
ANY67834.1 6.26e-205 1 858 1 874

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 8.33e-06 664 858 932 1135
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000207_01253.