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CAZyme Information: MGYG000000209_02587

You are here: Home > Sequence: MGYG000000209_02587

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_F sp003491505
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eubacterium_F; Eubacterium_F sp003491505
CAZyme ID MGYG000000209_02587
CAZy Family CBM36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1193 131869.76 9.9058
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000209 3107681 Isolate China Asia
Gene Location Start: 1116;  End: 4697  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8 3.2.1.4 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH8 645 956 2.7e-83 0.9375
CBM36 459 572 1.4e-19 0.9565217391304348

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3405 BcsZ 4.05e-51 600 962 8 349
Endo-1,4-beta-D-glucanase Y [Carbohydrate transport and metabolism].
PHA03247 PHA03247 1.93e-26 155 452 2667 2964
large tegument protein UL36; Provisional
pfam03442 CBM_X2 4.87e-26 979 1062 1 83
Carbohydrate binding domain X2. This domain binds to cellulose and to bacterial cell walls. It is found in glycosyl hydrolases and in scaffolding proteins of cellulosomes (multiprotein glycosyl hydrolase complexes). In the cellulosome it may aid cellulose degradation by anchoring the cellulosome to the bacterial cell wall and by binding it to its substrate. This domain has an Ig-like fold.
cd04078 CBM36_xylanase-like 1.04e-25 457 574 5 118
Carbohydrate Binding Module family 36 (CBM36); appended mainly to glycoside hydrolase family 11 (GH11) domains; xylan binding. This family includes carbohydrate binding module family 36 (CBM36) most of which appear appended to glycoside hydrolase family 11 (GH11) domains. These CBMs are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH11 catalytic modules with their dedicated, insoluble substrates. GH11 domains have xylanase (endo-1,4-beta-xylanase) activity which catalyzes the hydrolysis of beta-1,4 bonds of xylan, the major component of hemicelluloses, to generate xylooligosaccharides and xylose. This family includes XynB from Dictyoglomus thermophilum Rt46B.1 and Xyn11A from Pseudobutyrivibrio xylanivorans Mz5T. Xyn11A is a multicatalytic enzyme with an N-terminal GH11 domain, a CBM36 domain, and a C-terminal putative NodB-like polysaccharide deacetylase which is predicted to be an acetyl esterase involved in debranching activity in the xylan backbone. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold. Consistent with its structural and sequence similarity to CBM6, CBM36 binds xylan, but only at binding site I, and in a calcium-dependent manner; the latter suggests its potential application in affinity labeling.
PHA03247 PHA03247 5.59e-25 154 451 2619 2954
large tegument protein UL36; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUL54973.1 6.15e-188 457 1003 36 578
AAS85781.1 2.34e-159 588 1179 650 1294
QNU67295.1 1.08e-153 584 1013 22 448
ALQ07930.1 2.06e-149 476 968 47 554
QWG04463.1 4.96e-146 454 973 45 572

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6G00_A 2.88e-114 591 965 3 395
CrystalStructure of a GH8 xylanase from Teredinibacter turnerae [Teredinibacter turnerae T7901],6G09_A Crystal Structure of a GH8 xylobiose complex from Teredinibacter turnerae [Teredinibacter turnerae T7901],6G0B_A Crystal Structure of a GH8 xylotriose complex from Teredinibacter Turnerae [Teredinibacter turnerae T7901]
6G0N_A 1.52e-113 591 965 3 395
CrystalStructure of a GH8 catalytic mutant xylohexaose complex xylanase from Teredinibacter turnerae [Teredinibacter turnerae T7901]
6SUD_A 6.34e-113 593 964 7 380
Structureof L320A mutant of Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis],6SUD_B Structure of L320A mutant of Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis]
6SHY_A 1.23e-112 593 964 7 380
Structureof L320A/H321S double mutant of Rex8A from Paenibacillus barcinonensis [Paenibacillus barcinonensis],6SHY_B Structure of L320A/H321S double mutant of Rex8A from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
6SRD_A 1.23e-112 593 964 7 380
Structureof Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis],6SRD_B Structure of Rex8A from Paenibacillus barcinonensis complexed with xylose. [Paenibacillus barcinonensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A0S2UQQ5 6.31e-112 593 964 7 380
Reducing-end xylose-releasing exo-oligoxylanase Rex8A OS=Paenibacillus barcinonensis OX=198119 GN=rex8A PE=1 SV=1
Q9KB30 2.39e-100 593 964 7 379
Reducing end xylose-releasing exo-oligoxylanase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=BH2105 PE=1 SV=1
A1A048 2.00e-74 602 962 14 377
Reducing end xylose-releasing exo-oligoxylanase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=xylA PE=1 SV=1
P37701 1.76e-29 652 997 95 427
Endoglucanase 2 OS=Ruminiclostridium josui OX=1499 GN=celB PE=3 SV=1
Q3MUH7 3.43e-15 967 1093 773 896
Xyloglucanase OS=Paenibacillus sp. OX=58172 GN=xeg74 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.053120 0.945316 0.000587 0.000417 0.000276 0.000261

TMHMM  Annotations      download full data without filtering help

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