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CAZyme Information: MGYG000000234_01222

You are here: Home > Sequence: MGYG000000234_01222

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vagococcus teuberi
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Vagococcaceae; Vagococcus; Vagococcus teuberi
CAZyme ID MGYG000000234_01222
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
189 MGYG000000234_3|CGC4 20763.8 4.253
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000234 2257969 Isolate China Asia
Gene Location Start: 81362;  End: 81931  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000234_01222.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00118 LysM 2.83e-11 28 74 2 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 3.87e-11 29 74 2 44
Lysin motif.
pfam01476 LysM 8.71e-11 29 75 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
PRK11198 PRK11198 1.99e-07 16 74 85 145
LysM domain/BON superfamily protein; Provisional
PRK13914 PRK13914 3.88e-05 27 138 200 331
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
APB30912.1 9.26e-128 1 189 1 189
QNN73789.1 7.06e-73 1 189 1 193
AQP54502.1 6.56e-70 1 189 1 188
QIL47360.1 6.56e-70 1 189 1 188
ALS36128.1 5.30e-68 1 189 1 194

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9RVY3 4.96e-06 26 74 203 251
Uncharacterized protein DR_0888 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_0888 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000242 0.999038 0.000176 0.000172 0.000165 0.000154

TMHMM  Annotations      download full data without filtering help

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