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CAZyme Information: MGYG000000239_00236

You are here: Home > Sequence: MGYG000000239_00236

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003471585
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003471585
CAZyme ID MGYG000000239_00236
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
863 MGYG000000239_1|CGC2 93694.78 4.6287
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000239 2298700 Isolate China Asia
Gene Location Start: 280821;  End: 283412  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000239_00236.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 861 7.2e-69 0.9635922330097088

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.009 393 563 566 732
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH68834.1 0.0 1 863 1 863
ATP54541.1 0.0 13 863 4 850
QNM10672.1 1.64e-314 1 861 1 832
AGF57028.1 3.18e-250 8 862 7 846
ANY67834.1 6.34e-208 6 859 6 875

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.74e-07 664 862 932 1139
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000239_00236.