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CAZyme Information: MGYG000000265_01377
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides nordii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides nordii | |||||||||||
| CAZyme ID | MGYG000000265_01377 | |||||||||||
| CAZy Family | PL8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 118635; End: 124406 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL8 | 1421 | 1690 | 3.9e-45 | 0.9878542510121457 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam15425 | DUF4627 | 5.44e-78 | 467 | 658 | 1 | 195 | Domain of unknown function (DUF4627). This family of proteins is found in bacteria. Proteins in this family are approximately 230 amino acids in length. There is a conserved WYK sequence motif. |
| pfam15425 | DUF4627 | 2.26e-77 | 257 | 447 | 1 | 194 | Domain of unknown function (DUF4627). This family of proteins is found in bacteria. Proteins in this family are approximately 230 amino acids in length. There is a conserved WYK sequence motif. |
| pfam15425 | DUF4627 | 2.05e-70 | 679 | 872 | 1 | 195 | Domain of unknown function (DUF4627). This family of proteins is found in bacteria. Proteins in this family are approximately 230 amino acids in length. There is a conserved WYK sequence motif. |
| pfam15425 | DUF4627 | 9.40e-60 | 46 | 235 | 1 | 194 | Domain of unknown function (DUF4627). This family of proteins is found in bacteria. Proteins in this family are approximately 230 amino acids in length. There is a conserved WYK sequence motif. |
| cd01083 | GAG_Lyase | 9.49e-37 | 1148 | 1778 | 86 | 693 | Glycosaminoglycan (GAG) polysaccharide lyase family. This family consists of a group of secreted bacterial lyase enzymes capable of acting on glycosaminoglycans, such as hyaluronan and chondroitin, in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen. These are broad-specificity glycosaminoglycan lyases which recognize uronyl residues in polysaccharides and cleave their glycosidic bonds via a beta-elimination reaction to form a double bond between C-4 and C-5 of the non-reducing terminal uronyl residues of released products. Substrates include chondroitin, chondroitin 4-sulfate, chondroitin 6-sulfate, and hyaluronic acid. Family members include chondroitin AC lyase, chondroitin abc lyase, xanthan lyase, and hyalurate lyase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCI63816.1 | 5.11e-281 | 890 | 1843 | 24 | 967 |
| BCI64222.1 | 4.27e-260 | 890 | 1854 | 25 | 985 |
| QEK51405.1 | 3.48e-127 | 896 | 1809 | 28 | 920 |
| QJB31525.1 | 7.51e-125 | 897 | 1829 | 31 | 949 |
| QJB38007.1 | 1.39e-124 | 897 | 1829 | 31 | 949 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7EIP_A | 2.37e-36 | 994 | 1809 | 182 | 983 | ChainA, Chondroitin sulfate ABC endolyase [Proteus vulgaris],7EIQ_A Chain A, Chondroitin sulfate ABC endolyase [Proteus vulgaris],7EIR_A Chain A, Chondroitin sulfate ABC endolyase [Proteus vulgaris],7EIS_A Chain A, Chondroitin sulfate ABC endolyase [Proteus vulgaris] |
| 1HN0_A | 9.33e-36 | 994 | 1809 | 182 | 983 | CRYSTALSTRUCTURE OF CHONDROITIN ABC LYASE I FROM PROTEUS VULGARIS AT 1.9 ANGSTROMS RESOLUTION [Proteus vulgaris] |
| 2Q1F_A | 1.38e-29 | 890 | 1822 | 23 | 973 | Crystalstructure of chondroitin sulfate lyase abc from bacteroides thetaiotaomicron wal2926 [Bacteroides thetaiotaomicron],2Q1F_B Crystal structure of chondroitin sulfate lyase abc from bacteroides thetaiotaomicron wal2926 [Bacteroides thetaiotaomicron] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8A2I1 | 7.40e-36 | 890 | 1822 | 23 | 973 | Chondroitin sulfate ABC exolyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=chonabc PE=1 SV=1 |
| P59807 | 1.30e-35 | 994 | 1809 | 182 | 983 | Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2 |
| C5G6D7 | 2.91e-35 | 890 | 1822 | 23 | 973 | Chondroitin sulfate ABC exolyase OS=Bacteroides thetaiotaomicron OX=818 GN=chonabc PE=1 SV=2 |
| C7S340 | 6.98e-31 | 903 | 1809 | 26 | 954 | Chondroitin sulfate ABC exolyase (Fragment) OS=Proteus vulgaris OX=585 GN=ChABCII PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003138 | 0.746781 | 0.249068 | 0.000378 | 0.000310 | 0.000307 |
