dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000273_02515

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Species

Phocaeicola coprophilus

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprophilus

CAZyme ID

MGYG000000273_02515

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
349		40367.8	6.6042

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000273	3492533	Isolate	China	Asia

Gene Location

Start: 33428; End: 34477 Strand: -

No EC number prediction in MGYG000000273_02515.

Family	Start	End	Evalue	family coverage
GH29	43	345	1.3e-72	0.8323699421965318

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01120	Alpha_L_fucos	2.90e-51	45	343	26	324	Alpha-L-fucosidase.
smart00812	Alpha_L_fucos	1.09e-45	43	343	25	326	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
COG3669	AfuC	1.34e-41	28	343	6	308	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
pfam14488	DUF4434	0.002	76	172	17	116	Domain of unknown function (DUF4434).

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRO24265.1	8.17e-270	1	349	1	349
QCQ35196.1	5.78e-216	13	349	11	347
QTO26593.1	2.35e-215	13	349	11	347
QCQ30777.1	2.35e-215	13	349	11	347
QOD59462.1	2.74e-192	22	347	20	345

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4ZRX_A	6.59e-47	34	342	32	347	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
6ORG_A	3.09e-43	34	342	11	314	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A	4.29e-42	34	342	11	314	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6ORF_A	4.37e-42	34	342	11	314	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
5K9H_A	5.41e-40	28	336	37	341	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	2.97e-43	12	342	13	335	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	6.51e-40	27	342	37	336	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
P10901	2.20e-13	45	215	41	246	Alpha-L-fucosidase OS=Dictyostelium discoideum OX=44689 GN=alfA PE=3 SV=1
Q6AYS4	3.03e-12	43	205	44	234	Plasma alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca2 PE=2 SV=1
Q60HF8	4.14e-12	43	201	57	242	Tissue alpha-L-fucosidase OS=Macaca fascicularis OX=9541 GN=FUCA1 PE=2 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000468	0.998729	0.000258	0.000166	0.000173	0.000169

There is no transmembrane helices in MGYG000000273_02515.