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CAZyme Information: MGYG000000273_02807

You are here: Home > Sequence: MGYG000000273_02807

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprophilus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprophilus
CAZyme ID MGYG000000273_02807
CAZy Family GH141
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
557 MGYG000000273_43|CGC1 63207.38 5.3765
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000273 3492533 Isolate China Asia
Gene Location Start: 58;  End: 1731  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000273_02807.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH141 2 207 5.1e-25 0.3984819734345351

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 1.77e-09 70 221 23 136
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
cd00987 PDZ_serine_protease 7.17e-09 457 545 2 90
PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.
cd00989 PDZ_metalloprotease 9.29e-06 484 545 16 77
PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.
pfam17820 PDZ_6 1.38e-05 489 536 7 54
PDZ domain. This entry represents the PDZ domain from a wide variety of proteins.
COG0265 DegQ 0.001 438 551 231 344
Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWW32784.1 2.55e-144 2 522 259 773
QDT08270.1 3.28e-21 17 430 285 720
QDU37998.1 1.36e-20 17 426 288 719
QDV88786.1 2.90e-20 2 442 278 697
QEG43124.1 3.22e-20 18 436 286 726

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000273_02807.