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CAZyme Information: MGYG000000330_00906
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lentilactobacillus parabuchneri | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus; Lentilactobacillus parabuchneri | |||||||||||
| CAZyme ID | MGYG000000330_00906 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | Chromosome partition protein Smc | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 163319; End: 168895 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR01760 | tape_meas_TP901 | 7.40e-40 | 304 | 669 | 1 | 346 | phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions] |
| pfam10145 | PhageMin_Tail | 5.51e-38 | 353 | 563 | 1 | 200 | Phage-related minor tail protein. Members of this family are found in putative phage tail tape measure proteins. |
| COG5283 | COG5283 | 1.73e-25 | 1 | 697 | 1 | 564 | Phage-related tail protein [Mobilome: prophages, transposons]. |
| pfam18013 | Phage_lysozyme2 | 2.20e-21 | 1603 | 1735 | 1 | 139 | Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer. |
| PRK13914 | PRK13914 | 4.97e-12 | 1402 | 1540 | 352 | 481 | invasion associated endopeptidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGV25903.1 | 0.0 | 1 | 1858 | 1 | 1858 |
| QUX05887.1 | 0.0 | 1 | 1858 | 1 | 1858 |
| QOJ84576.1 | 0.0 | 1 | 1858 | 1 | 1858 |
| QEU39038.1 | 0.0 | 1 | 1858 | 1 | 1858 |
| QOP51607.1 | 0.0 | 1 | 1858 | 1 | 1858 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3I86_A | 1.97e-06 | 1413 | 1529 | 1 | 127 | Crystalstructure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis],3I86_B Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis] |
| 3PBI_A | 2.73e-06 | 1434 | 1532 | 100 | 203 | ChainA, Invasion Protein [Mycobacterium tuberculosis] |
| 3NE0_A | 4.94e-06 | 1435 | 1524 | 111 | 193 | Structureand functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation [Mycobacterium tuberculosis H37Rv] |
| 3PBC_A | 4.94e-06 | 1435 | 1524 | 111 | 193 | ChainA, Invasion Protein [Mycobacterium tuberculosis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E7DNB6 | 1.28e-13 | 356 | 644 | 103 | 374 | Tape measure protein OS=Pneumococcus phage Dp-1 OX=59241 GN=TMP PE=4 SV=1 |
| O64314 | 1.38e-13 | 420 | 699 | 300 | 580 | Probable tape measure protein OS=Escherichia phage P2 OX=10679 GN=T PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000032 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |