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CAZyme Information: MGYG000000345_00080
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA1829 sp002338895 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp002338895 | |||||||||||
| CAZyme ID | MGYG000000345_00080 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 94836; End: 96170 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 55 | 385 | 7.9e-44 | 0.9702970297029703 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 1.89e-38 | 98 | 384 | 3 | 263 | Glycosyl hydrolase family 10. |
| pfam00331 | Glyco_hydro_10 | 5.67e-27 | 76 | 386 | 22 | 310 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 6.29e-25 | 98 | 386 | 69 | 339 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| cd19608 | GH113_mannanase-like | 0.002 | 259 | 388 | 181 | 310 | Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVM44415.1 | 1.39e-108 | 21 | 442 | 24 | 438 |
| QMW04637.1 | 8.35e-100 | 21 | 435 | 34 | 437 |
| QIP12711.1 | 2.56e-98 | 22 | 432 | 35 | 433 |
| QHV94149.1 | 7.21e-98 | 21 | 432 | 34 | 433 |
| AEI51978.1 | 1.63e-92 | 21 | 443 | 34 | 440 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7D88_A | 1.56e-22 | 12 | 424 | 38 | 402 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 7D89_A | 1.28e-21 | 12 | 424 | 38 | 402 | ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)] |
| 4L4O_A | 2.13e-12 | 109 | 348 | 54 | 301 | Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725] |
| 4PMD_A | 1.16e-11 | 109 | 348 | 54 | 301 | Crystalstructure of CbXyn10B from Caldicellulosiruptor bescii and its mutant(E139A) in complex with hydrolyzed xylotetraose [Caldicellulosiruptor bescii DSM 6725] |
| 4L4P_A | 1.22e-11 | 109 | 348 | 54 | 301 | themutant(E139A) structure in complex with xylotriose [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DH97 | 2.52e-16 | 20 | 436 | 382 | 750 | Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1 |
| O80596 | 1.59e-14 | 51 | 438 | 715 | 1056 | Endo-1,4-beta-xylanase 2 OS=Arabidopsis thaliana OX=3702 GN=XYN2 PE=3 SV=1 |
| O69230 | 2.16e-09 | 124 | 348 | 431 | 674 | Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000071 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |