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CAZyme Information: MGYG000000424_02524
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-353 sp900768995 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; CAG-353; CAG-353 sp900768995 | |||||||||||
| CAZyme ID | MGYG000000424_02524 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 8596; End: 10242 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 215 | 542 | 2e-91 | 0.9933993399339934 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 2.39e-101 | 216 | 542 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 5.53e-86 | 258 | 540 | 2 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.83e-66 | 191 | 542 | 4 | 339 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam02018 | CBM_4_9 | 2.79e-04 | 57 | 178 | 4 | 131 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
| COG3417 | LpoB | 0.002 | 1 | 165 | 1 | 175 | Outer membrane lipoprotein LpoB, binds and activates PBP1b [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADU22101.1 | 1.82e-134 | 210 | 543 | 48 | 382 |
| ADX05730.1 | 4.68e-126 | 138 | 548 | 10 | 422 |
| AEE64767.1 | 1.43e-124 | 210 | 543 | 35 | 369 |
| BAF93203.1 | 1.01e-115 | 212 | 543 | 61 | 392 |
| BCJ96140.1 | 4.88e-97 | 82 | 544 | 62 | 547 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2W5F_A | 3.36e-67 | 81 | 548 | 50 | 532 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 7NL2_A | 8.52e-67 | 210 | 548 | 6 | 345 | ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069] |
| 2WYS_A | 9.70e-65 | 129 | 548 | 103 | 532 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 6D5C_A | 1.28e-64 | 214 | 543 | 21 | 350 | Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii] |
| 5OFJ_A | 1.57e-61 | 214 | 543 | 9 | 338 | Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26223 | 2.38e-85 | 215 | 543 | 2 | 337 | Endo-1,4-beta-xylanase B OS=Butyrivibrio fibrisolvens OX=831 GN=xynB PE=3 SV=1 |
| Q60037 | 2.88e-70 | 52 | 541 | 200 | 690 | Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1 |
| Q60042 | 2.09e-67 | 52 | 541 | 195 | 686 | Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1 |
| P51584 | 3.13e-64 | 81 | 548 | 61 | 543 | Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1 |
| P10474 | 8.32e-61 | 189 | 543 | 20 | 372 | Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000000 | 1.000039 | 0.000000 | 0.000000 | 0.000000 |