logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000441_01907

You are here: Home > Sequence: MGYG000000441_01907

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900545705
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900545705
CAZyme ID MGYG000000441_01907
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
617 MGYG000000441_20|CGC1 68592.84 9.4084
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000441 2454454 MAG Sweden Europe
Gene Location Start: 12235;  End: 14088  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000441_01907.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 71 250 1.1e-29 0.4872389791183295

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 1.37e-07 60 195 65 218
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 2.26e-07 64 176 46 167
Glycosyl hydrolase family 10.
pfam01229 Glyco_hydro_39 6.65e-06 109 243 122 270
Glycosyl hydrolases family 39.
smart00633 Glyco_10 7.62e-06 64 244 3 194
Glycosyl hydrolase family 10.
COG3867 GanB 0.006 51 211 73 258
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 3.04e-188 27 604 28 603
QDU57372.1 2.73e-95 27 609 29 624
AVM44901.1 6.88e-62 27 534 26 549
AHF90941.1 2.49e-39 27 567 233 803
SEH85923.1 6.05e-34 40 250 55 279

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 1.87e-13 44 331 36 349
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 1.87e-13 44 331 36 349
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
5JVK_A 5.44e-13 4 256 83 353
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
I1S3C6 5.70e-08 51 174 112 243
Endo-1,4-beta-xylanase D OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLD PE=1 SV=1
A1CX14 4.01e-06 51 244 61 251
Probable endo-1,4-beta-xylanase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnC PE=2 SV=1
Q0H904 9.95e-06 51 196 62 237
Endo-1,4-beta-xylanase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xlnC PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000386 0.998718 0.000386 0.000167 0.000156 0.000159

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000441_01907.