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CAZyme Information: MGYG000000468_00565

You are here: Home > Sequence: MGYG000000468_00565

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1696 sp900554225
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UMGS1696; UMGS1696 sp900554225
CAZyme ID MGYG000000468_00565
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
709 79954.81 6.249
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000468 2935049 MAG Fiji Oceania
Gene Location Start: 43121;  End: 45250  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000468_00565.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 483 597 5.5e-24 0.835820895522388

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 1.14e-07 68 388 82 403
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 2.71e-06 463 643 2 185
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44278.1 1.70e-164 16 632 12 624
AJR05048.1 2.58e-105 15 701 11 700
AOM00979.1 1.36e-104 15 648 11 641
AYO23963.1 1.82e-103 15 702 11 691
ANO33566.1 7.10e-101 15 701 11 693

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 1.52e-33 20 629 28 666
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 2.64e-32 20 629 28 666
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000468_00565.