Species | UBA2883 sp002103075 | |||||||||||
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Lineage | Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; UBA2883; UBA2883 sp002103075 | |||||||||||
CAZyme ID | MGYG000000493_00293 | |||||||||||
CAZy Family | GH23 | |||||||||||
CAZyme Description | Soluble lytic murein transglycosylase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 15507; End: 16175 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH23 | 117 | 221 | 4.7e-35 | 0.7777777777777778 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd00254 | LT-like | 7.65e-53 | 118 | 221 | 2 | 110 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
cd13401 | Slt70-like | 5.65e-49 | 106 | 221 | 10 | 146 | 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
cd16896 | LT_Slt70-like | 1.41e-45 | 106 | 221 | 8 | 144 | uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
cd13403 | MLTF-like | 1.17e-38 | 111 | 221 | 6 | 156 | membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins. This subfamily includes membrane-bound lytic murein transglycosylase F (MltF, murein lyase F) that degrades murein glycan strands. It is responsible for catalyzing the release of 1,6-anhydromuropeptides from peptidoglycan. Lytic transglycosylase catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do goose-type lysozymes. However, in addition, it also makes a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
pfam01464 | SLT | 8.02e-38 | 110 | 213 | 5 | 114 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AOR38062.1 | 1.57e-78 | 1 | 222 | 1 | 238 |
ADG80978.1 | 1.75e-54 | 61 | 220 | 16 | 173 |
QNF30947.1 | 7.01e-52 | 105 | 221 | 31 | 147 |
QGQ48609.1 | 8.41e-52 | 90 | 221 | 78 | 209 |
QHM17279.1 | 1.58e-51 | 25 | 221 | 41 | 242 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5MPQ_A | 1.55e-16 | 58 | 220 | 377 | 551 | BulgecinA: The key to a broad-spectrum inhibitor that targets lytic transglycosylases [Neisseria meningitidis] |
6FPN_B | 1.56e-16 | 58 | 220 | 387 | 561 | Lytictransglycosylase in action [Neisseria meningitidis MC58] |
5O1J_A | 1.56e-16 | 58 | 220 | 381 | 555 | Lytictransglycosylase in action [Neisseria meningitidis MC58] |
5O24_A | 1.57e-16 | 58 | 220 | 391 | 565 | Lytictransglycosylase in action [Neisseria meningitidis] |
5O29_A | 1.57e-16 | 58 | 220 | 397 | 571 | Lytictransglycosylase in action [Neisseria meningitidis] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
O31608 | 1.76e-50 | 40 | 221 | 12 | 179 | Putative murein lytic transglycosylase YjbJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbJ PE=3 SV=1 |
O64046 | 3.18e-40 | 104 | 221 | 1424 | 1541 | Probable tape measure protein OS=Bacillus phage SPbeta OX=66797 GN=yomI PE=3 SV=1 |
O31976 | 3.18e-40 | 104 | 221 | 1424 | 1541 | SPbeta prophage-derived uncharacterized transglycosylase YomI OS=Bacillus subtilis (strain 168) OX=224308 GN=yomI PE=3 SV=2 |
P27380 | 5.42e-19 | 106 | 220 | 11 | 118 | Transglycosylase OS=Enterobacteria phage PRD1 OX=10658 GN=VII PE=1 SV=3 |
A8H256 | 1.42e-15 | 100 | 194 | 274 | 376 | Membrane-bound lytic murein transglycosylase F OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) OX=398579 GN=mltF PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
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1.000066 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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