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CAZyme Information: MGYG000000517_02255
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1889 sp900556055 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS1889; UMGS1889 sp900556055 | |||||||||||
| CAZyme ID | MGYG000000517_02255 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 15445; End: 16611 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH5 | 69 | 357 | 1.1e-55 | 0.9901639344262295 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd21510 | agarase_cat | 4.14e-07 | 189 | 295 | 86 | 187 | alpha-beta barrel catalytic domain of agarase, such as GH86-like endo-acting agarases identified in non-marine organisms. Typically, agarases (E.C. 3.2.1.81) are found in ocean-dwelling bacteria since agarose is a principle component of red algae cell wall polysaccharides. Agarose is a linear polymer of alternating D-galactose and 3,6-anhydro-L-galactopyranose. Endo-acting agarases, such as glycoside hydrolase 16 (GH16) and GH86 hydrolyze internal beta-1,4 linkages. GH86-like endo-acting agarase of this protein family has been identified in the human intestinal bacterium Bacteroides uniformis. This acquired metabolic pathway, as demonstrated by the prevalence of agar-specific genetic cluster called polysaccharide utilization loci (PULs), varies considerably between human populations, being much more prevalent in a Japanese sample than in North America, European, or Chinese samples. Agarase activity was also identified in the non-marine bacterium Cellvibrio sp. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL16471.1 | 5.85e-137 | 60 | 388 | 35 | 364 |
| CCO03823.1 | 6.27e-133 | 59 | 388 | 63 | 399 |
| ADD61974.1 | 8.47e-133 | 60 | 388 | 73 | 408 |
| ADU21807.1 | 3.48e-119 | 26 | 388 | 41 | 410 |
| QHT63496.1 | 1.71e-109 | 60 | 385 | 38 | 366 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3VUP_A | 4.47e-32 | 65 | 354 | 9 | 322 | Beta-1,4-mannanasefrom the common sea hare Aplysia kurodai [Aplysia kurodai],3VUP_B Beta-1,4-mannanase from the common sea hare Aplysia kurodai [Aplysia kurodai] |
| 5Y6T_A | 6.18e-24 | 67 | 358 | 17 | 330 | ChainA, endo-1,4-beta-mannanase [Eisenia fetida] |
| 4OOU_A | 1.40e-22 | 62 | 362 | 27 | 349 | Crystalstructure of beta-1,4-D-mannanase from Cryptopygus antarcticus [Cryptopygus antarcticus],4OOU_B Crystal structure of beta-1,4-D-mannanase from Cryptopygus antarcticus [Cryptopygus antarcticus],4OOZ_A Crystal structure of beta-1,4-D-mannanase from Cryptopygus antarcticus in complex with mannopentaose [Cryptopygus antarcticus],4OOZ_B Crystal structure of beta-1,4-D-mannanase from Cryptopygus antarcticus in complex with mannopentaose [Cryptopygus antarcticus] |
| 3ZIZ_A | 1.86e-06 | 59 | 256 | 17 | 214 | ChainA, Gh5 Endo-beta-1,4-mannanase [Podospora anserina] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B4XC07 | 7.16e-22 | 62 | 362 | 27 | 349 | Mannan endo-1,4-beta-mannosidase OS=Cryptopygus antarcticus OX=187623 PE=1 SV=1 |
| A1C8U0 | 1.64e-08 | 62 | 256 | 99 | 295 | Mannan endo-1,4-beta-mannosidase F OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=manF PE=3 SV=1 |
| B8NIV9 | 2.97e-07 | 62 | 256 | 124 | 320 | Probable mannan endo-1,4-beta-mannosidase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=manF PE=3 SV=1 |
| Q2U2I3 | 9.22e-07 | 62 | 256 | 124 | 320 | Probable mannan endo-1,4-beta-mannosidase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=manF PE=3 SV=2 |
| B2B3C0 | 9.96e-06 | 59 | 256 | 31 | 228 | Mannan endo-1,4-beta-mannosidase A OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OX=515849 GN=Pa_6_490 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000001 | 1.000048 | 0.000000 | 0.000000 | 0.000000 |